Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2658 ATGTCCCTGTTTCCCAAAACTGAGAAAAACGACGTCCTCGTCGTCGACATTGATAGCGAGAGCGAAGACGGCGACACCGTAGTTTCCACCATAAAAGACGAGTTGTCACAGAAGATTCCATCGTCTCAAGTCGAGCTTGTGCAGCAAGAAACACCTGTGTCGAGTTCCGCTCTTTCGGTTCCCGACGGCCGGTTCAGAAGTTTCTGGAAAGCCGGGGATTTCGTTGTTGGTCCCTCTTCGAAGCCCGCGCCCTTTCAAGGTCACTTAGAACATGCTCGGGTGCACCCCAAGTTTCTGCATTCTAATGCAACTTCCCATAAATGGGCTTTTGGAGCAATTGCTGAGCTAGTGGATAATGCTGTTGATGAGATTCAAAATGGGGCAACTTTTGTAAAGATTGATAAGTTTGATGTCAAGAAGGATAATTCACCAGCATTATGTTTCCTAGATGATGGTGGTGGAATGGATCCTAACTCAATTCGAAAATGCATGAGCTTGGGTTATTCATCAAAGAAGTCAAAGACAACAATTGGACAGTATGGCAACGGATTCAAGACTAGTACCATGAGACTGGGCGCTGATGCTATTGTTTTCAGTAGGGCAAGGCATTCAGGCCGGGCAACACAAAGTGTGGGTCTACTATCCTATACTTTTTTGCGGAGAACTGGGCAAGATGACGTAGTTGTTCCAATGATAGATTTTGACATATCTGGCCATTGGGCTGAGCCAATTATTTATAGCTCACAGGATGAATGGTCAGCGAACTTGAAAACAATTCTTGATTGGTCTCCATTCACATCAAAGGAGGAGCTCATGCTTCAGTTTGATGATATAGGATCACATGGAACCAAAGTTTTAATTTACAATTTGTGGTTGAATGATGAAGGGATATATGAATTGAGTTTTGATGACGATGTTGAGGATATTATGCTGAGAGATGAGGCTAACCATGGGGCTGAGAAAAAACTGAACAAAAAAACTGTTCAGCTTCAGTCACATATTTCTTACCGCATTCGTTATTCTTTACGGGCATATGTTTCGATGTTGTACCTTAGAAAATTTTCTAACTTCAAAATCATGCTAAGGGGTAAACTTGTGGATCAATTCAACATAGTAGATGACTTGATACATTCAAAAGTAATTCCATATAGGCCTCAACTAGCCATTGCATCAAATGAGGCCATAGCAGAGACAAAGACAACCATTGGATTTATAAAGGAGGCTGCTTCTATTAAGGTTACTGGATTTAATGTGTACCACAAAAATCGCCTAATCAAGCCCTTCTGGAAAGTAGTTTCCGATGGTTCATCAAAAGGGAGTTGTGTTGTTGGAGTTCTTGAAGCCAATTTTATAGAACCAGCACATGACAAGCAGGATTTTGAGAGATCAGTGTTGTTCATTCGGTTGGAAAACAAGCTGAAACAAATGACCATGGATTACTGGAAAGGCCACTGTCACTTGATTGGATATCAGCCCCAAATATTCAAATCACAAAATCTTGTAAAAGAAGCCCAGATTCGAAAATCAGCTGAACTTTCAACTAATCCACAGAATGAATTGCCCTCTGATCAACAGGTTACTGGTGTGGTTCCTCAGCATCCAAACACCCTGAGTTTAAATCAAACAATTGTTGGTCTTGATGTGACTGGCATGCAAGATTTAAGTCGCAAGCAAATTGGTACAATGGTTGGAACTCCGCAGTCTGTATCTGTTGATGAAATCTGTGCAGAAAACATACAACTATTTGAGAGGTGTGAGGAGTATAGGTTAAAGGAGACAGAACTGAAAAAGACGGTTGTAGTCTTGGAAGAGGAATATAAACAAATCCAGAAGAAATGCGCCGTTCTTGCTTCACTCTTGGAGATCAAGAGGAAGGAGAAGCATGTTAAGGGATGA 1896 0.4156 MSLFPKTEKNDVLVVDIDSESEDGDTVVSTIKDELSQKIPSSQVELVQQETPVSSSALSVPDGRFRSFWKAGDFVVGPSSKPAPFQGHLEHARVHPKFLHSNATSHKWAFGAIAELVDNAVDEIQNGATFVKIDKFDVKKDNSPALCFLDDGGGMDPNSIRKCMSLGYSSKKSKTTIGQYGNGFKTSTMRLGADAIVFSRARHSGRATQSVGLLSYTFLRRTGQDDVVVPMIDFDISGHWAEPIIYSSQDEWSANLKTILDWSPFTSKEELMLQFDDIGSHGTKVLIYNLWLNDEGIYELSFDDDVEDIMLRDEANHGAEKKLNKKTVQLQSHISYRIRYSLRAYVSMLYLRKFSNFKIMLRGKLVDQFNIVDDLIHSKVIPYRPQLAIASNEAIAETKTTIGFIKEAASIKVTGFNVYHKNRLIKPFWKVVSDGSSKGSCVVGVLEANFIEPAHDKQDFERSVLFIRLENKLKQMTMDYWKGHCHLIGYQPQIFKSQNLVKEAQIRKSAELSTNPQNELPSDQQVTGVVPQHPNTLSLNQTIVGLDVTGMQDLSRKQIGTMVGTPQSVSVDEICAENIQLFERCEEYRLKETELKKTVVVLEEEYKQIQKKCAVLASLLEIKRKEKHVKG* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2658 631 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 7 629 IPR045261 GO:0016887
Pvu3g2658 631 Coils Coil 585 612 - -
Pvu3g2658 631 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 109 290 IPR036890 -
Pvu3g2658 631 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 111 208 - -
Pvu3g2658 631 Gene3D - 95 289 IPR036890 -
Pvu3g2658 631 PANTHER PROTEIN MICRORCHIDIA 1-RELATED 7 629 - -
Pvu3g2658 631 Pfam Morc6 ribosomal protein S5 domain 2-like 340 481 IPR041006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2658 Pvu-Chr3 48615312 48641111 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2658 - - gmx:100781431 1044.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2658 3 48615312 48641111 Pvu3g2658 3 48615312 48641111 ECH