Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2655 ATGGAGCACTTAGAGATGGTGAGTGAAGTGAAACATCAAAGAATCAAAGCCAACGGGATATGGATACATGTGGCAGAGAAAGGGACAGGTCCACTTGTTCTTCTGCTTCATGGCTTCCCAGAATTATGGTATGCCTGGCGCCACCAGATCAATTACTTGGCCCAACATGGCTATCATGCGGTTGCACCTGATCTAAGAGGATATGGTGACTCTGATTCTCCTATTGATCCTTCTTCCTACACTTTTCACCACGTTGTAGGTGATCTTATAGCTTTGCTTGACCATTTTGGTGAACAACAGGCATTTGTTGTTGGGTCTGATTGGGGAGCAAACATTGGATGGCATCTAAGCCTGTTTAGACCTGACAGAGTAAAAGGATTTGTTGCTCTGGGTGTTCCTTACCACCCTAGATCTCCCACCACTAAACCGGTTGAAATTATCAGAAATTTTTTTGGAGATCAGAGTCATGTCTGCCAGTTCCAGGAACCAGGCAGAGCAGAGAGAGCTTTTGCTAGATATGATTATTTGACAGTGATGAAGAAGTTTATTCTGATGACATGTAAAGATTTTCTAGCATCTCCACCGGGCATGGAGCTAATTGATTTCCTGTCAACACCTTCGGTTCTGCCATCATGGATAACTGAGGAAGAACTCACTTTCTTTGCAGACAAATTCCAAGAGTCTGGTTTCACTGGTCCACTCAATTATTACCGTGCAATGGACTTAAATTGGGAGCTTCTTGCACCATGGCAAGGATCAAAGATAACAGTTCCAACGAAGTTCATAGCAGGAAACAAAGACATGGCTTTTGATTTTGAAACAGCCGGTACAAAGGCTTTTGTGGAAAGTGGTCTTTTCAAGAGCCTTGTTCCCAACCTTGAAGTTGTTATAATAGACGGCCACCATTTTATACATCAAGAAAAAGCCCAAGAAGTTTCGGACGAAATCCTTTCCTTCATCCGTAGATTTCCACCCAATGCTTCCATATAA 990 0.4293 MEHLEMVSEVKHQRIKANGIWIHVAEKGTGPLVLLLHGFPELWYAWRHQINYLAQHGYHAVAPDLRGYGDSDSPIDPSSYTFHHVVGDLIALLDHFGEQQAFVVGSDWGANIGWHLSLFRPDRVKGFVALGVPYHPRSPTTKPVEIIRNFFGDQSHVCQFQEPGRAERAFARYDYLTVMKKFILMTCKDFLASPPGMELIDFLSTPSVLPSWITEEELTFFADKFQESGFTGPLNYYRAMDLNWELLAPWQGSKITVPTKFIAGNKDMAFDFETAGTKAFVESGLFKSLVPNLEVVIIDGHHFIHQEKAQEVSDEILSFIRRFPPNASI* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2655 329 Gene3D alpha/beta hydrolase 7 323 IPR029058 -
Pvu3g2655 329 PRINTS Epoxide hydrolase signature 37 55 IPR000639 GO:0003824
Pvu3g2655 329 PRINTS Epoxide hydrolase signature 57 72 IPR000639 GO:0003824
Pvu3g2655 329 PRINTS Epoxide hydrolase signature 103 116 IPR000639 GO:0003824
Pvu3g2655 329 PRINTS Epoxide hydrolase signature 117 130 IPR000639 GO:0003824
Pvu3g2655 329 PRINTS Epoxide hydrolase signature 257 273 IPR000639 GO:0003824
Pvu3g2655 329 PRINTS Epoxide hydrolase signature 297 319 IPR000639 GO:0003824
Pvu3g2655 329 Pfam alpha/beta hydrolase fold 31 307 IPR000073 -
Pvu3g2655 329 PANTHER BIFUNCTIONAL EPOXIDE HYDROLASE 2 2 324 - -
Pvu3g2655 329 PANTHER EPOXIDE HYDROLASE 2 324 - -
Pvu3g2655 329 SUPERFAMILY alpha/beta-Hydrolases 8 322 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2655 Pvu-Chr3 48553486 48555473 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2655 6 323 Acyl Lipid Metabolism Gene Families AT3G51000 62.305 4.29e-150 423
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2655 - - pvu:PHAVU_003G257900g 687.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2655 3 48553486 48555473 Pvu3g2655 3 48553486 48555473 ECH