Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2648 ATGGGCGGCGGTGAGGGCGAAGATGGATGGCGTTACACATGGGAAGCACAGTCCCATGTCCCAACGCTGCGTTTAATGCTCTTCCCCAATGACAAAACCCTAAACCCCTCTCTCCAATGCCACGACCTCGCCGTCAACCTTCACTCCTCACACTCTTTCCTCACTCTCACAACTTCCTCCCTCTCCCTTAGGGTTCCACTTCCAGCCGTCTTGGTCGATGCCGACTCTCCGGTAACATTTCGCCCACTTTCCGACCACATCGAGGTCAAGCTCCTCCTTCTCCTCCCCGTCGACCATCCCATTCTCTCCTCACTTCACCCTTCAACATCTCCGCTGCCTGACCCTCTTATATCAGAATCTGATGTGTCAAAATTGTCTTCTGCAGGAGAAGTTGACTTTTACTGCAGAACTTGTACCTTCAAGTTGACCAGAATTCCTCTCAGGAATTTTGTTGAAATGCCATCGGTGAATTGGAGAGAAGTGGCTGACAACTGGTTTGGGGCTTGTTGTTGCTCTTTTGGAGGAATAAGTGAGAAGATGGTGATGAGGTATGTCAGTTCCTATACGTGCGTGCCAGGGGTCTGTCTTTTAAGTTCTGCTTCTGTCACACTTTGCAAGGATGATCTTGTGGAATATAATTTTCCAGAAGGGTGTGGAAAGCAAGAGTGTACTTCTGTAGCAGAAAACCCCAGAGATGATGCTATCGGCAAAGTTTCAAGAAACTGTGAATTGAATGATGAAAGGACTTCAACTTGCAGTGATGATGAAAGAACTTCAACTTGCAGTGATGATGGAGGAGTGACCCTTGCTTTTGGTAGCAATTATAGGTTTGTAGACTCTGAGGATGAGAAGCTTTCTATGAATTTGAGATGTGAAGTTGCAAAGAGTAAACCTGATTGTGGTCATTTCTCTGATTCACATCCAGATTCGAATGGCACCAAAGATGTCTCTGAAACTCCGAGTTGTTGTGCTCGAATGACAAACAATCTCGGGGATGAACACAGTGAGCATCATTCATGTGGAACTGCTGGAAGGGAAGGGATGCCAACAGAGACCCTGGAAATTCTGGGAAATCAGAAGTCTCTACTTAACGGTTTTCTTGAAGATATTTTCATGGCTAGATTATCAAATCTTACAAAGGATATTGATTGGCGTGAATTTACATGCCCTCAATGCAGGTCTCTCATTGGAGCCTACCCATGTTGTGAGGGCCATACACCAGTAGATGAAGGAGTACGGCTGTTCAAATGTTACATTTCAACTTGTTTGCCAGTTGGAGGACCCGAGGACATGTTCAGCAAATATTCAATGGGCAAAATGTTTGCAAATCGGTTGGTGGAGTGTGCAAGTGACGAATCATTATTTCGGTTTGTGATTAGAGATCTAACAACCAAAGCCCCCGTTCTACAAATCATTCTTTTAAATCCAGATACTTGGTCTTGTTCTGGTAATTGTTCTGGTACAGAGGACAAAGACCCAGTTCATAAACTTAAGTTACAGCCCATCATCAAAGTGCTTTATTCTGACTGCCACAATGCAACAGAATCTCAATCAAGGATTATAGAGGAATGGGCAACGAAGAGTTCCGCTGAAAGCATTTTCATGATGACTCGTCAGTCACAAGAATTGGTGGGATTGTTCATCTCAGCAAAAGATTTATATCCACCTTCATGCGCTTCCTTTCAAGGTTTAATTTTGTCATCTTTGCAATGGTAG 1716 0.4441 MGGGEGEDGWRYTWEAQSHVPTLRLMLFPNDKTLNPSLQCHDLAVNLHSSHSFLTLTTSSLSLRVPLPAVLVDADSPVTFRPLSDHIEVKLLLLLPVDHPILSSLHPSTSPLPDPLISESDVSKLSSAGEVDFYCRTCTFKLTRIPLRNFVEMPSVNWREVADNWFGACCCSFGGISEKMVMRYVSSYTCVPGVCLLSSASVTLCKDDLVEYNFPEGCGKQECTSVAENPRDDAIGKVSRNCELNDERTSTCSDDERTSTCSDDGGVTLAFGSNYRFVDSEDEKLSMNLRCEVAKSKPDCGHFSDSHPDSNGTKDVSETPSCCARMTNNLGDEHSEHHSCGTAGREGMPTETLEILGNQKSLLNGFLEDIFMARLSNLTKDIDWREFTCPQCRSLIGAYPCCEGHTPVDEGVRLFKCYISTCLPVGGPEDMFSKYSMGKMFANRLVECASDESLFRFVIRDLTTKAPVLQIILLNPDTWSCSGNCSGTEDKDPVHKLKLQPIIKVLYSDCHNATESQSRIIEEWATKSSAESIFMMTRQSQELVGLFISAKDLYPPSCASFQGLILSSLQW* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2648 571 Pfam HECT-like Ubiquitin-conjugating enzyme (E2)-binding 39 562 IPR019193 -
Pvu3g2648 571 PANTHER E3 UBIQUITIN-PROTEIN LIGASE E3D FAMILY MEMBER 11 570 IPR019193 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2648 - - vun:114179863 1049.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2648 3 48502713 48506805 Pvu3g2648 3 48502713 48506805 ECH