Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2642 ATGTCATTCTTTTCCTCTTCCAAACCCGATTCAAACCTCGCCACCGCCAAGGCGGTCCTCTCGACGGCGGCCTCGGTGGCCGCCACTGCAATGGTGATACGATCGGTGGCCAGTGAGCTCCTCCCGCCGGAGTTCATGTCCTACGTCAGAGATGGCTTCCGCAGCGCGCTGTCGCGGTTCTCATCGGAGACAACGATGGTGATCGAGGAGTTCGACGGCCTCGTGAGCAACCAAATCTACGAGGCGGCGGAGACCTACCTCGGCACCAAAATCTCCCCCTCCTCCCAGAGACTCAAGGTGACCAAACCCGAAACTGATGACACCTTCATCCTCACAATGGAGCGCAACGAGTGTCTCGACGACGTGTTTAACGGCGTCAAGTTTAACTGGGTCCTGGTGTGCCGTCAAGTGGAGACCCGGCACTTCCACAACCCGCGCGACCTGAACGCCTCTTTGAAATCGGAGGTTCGGTCCTTGGAACTGAGGTTCCACAAGAAGCACAAAGACATGGTCCTCAACACCTACCTTCCCTTCATTCTGAAGGAGGCCAAGTCCTTGAAGCAGGCGACGAAGGCCTTGAGGATCTTCACCGTGGATTACAACTACATGTACGGAAACCCCAACGACGCCTGGGCTGGGATCAATCTGGACCACCCCGCCACGTTTGACACGCTGGCTCTGGAGCGTGACGTGAAGGAGTTTGTGATGAGGGATTTGGAGAGGTTTGTGGCGAGGAAGGAGTATTATAGAAAAGTTGGGAAGGCCTGGAAGAGAGGCTACTTGCTCTATGGCCCTCCCGGTACAGGCAAATCCAGTTTGATAGCTGCTATGGCCAATTACTTGCGCTTTGATGTCTACGACTTGGAGCTCACCGAGTTGCAGTCCAATTCCGATCTCAGGAGGTTGCTCATTGCCATGGCTAATAGGTCCATTCTCGTTGTTGAGGACATTGATTGCACTATTCAGTTTCACGATCGCAGAGCACAGGCCACACCCTCTTCCTCTGCAAATAATAAAGACAAACAGGTTACACTATCGGGGTTGCTGAATTTCACTGACGGGTTATGGTCAAGTTGTGGGGACGAGAGAATAATAGTGTTCACAACAAACCACAAGGACAAGCTTGACCCTGCTTTGCTCCGCCCTGGTCGCATGGATGTTCATATTCACATGTCCTATTGCACTCCCTGTGGTTTCAGGCAGCTAACTTCCAATTACCTCGGAATCAAAGAACATGATCTCTTCCCACAGATTGAGGAAGAAATTCAGAAAACCCAGGTGACTCCAGCTGAAGTGGCAGAACAGCTTCTGAAGAGCAGCGACATTGAAACTTGTCTTAAACAGCTTATAGATTTCCTAATAAAAAAGAAAGAAACACAGGAACTGGAGGCTAAAAAGAAGGAACAGGAGGCCAAAAATAAAGAGGAACAACAGAAGGAGATTGATGACGGTGGTAAAGGAGAAGAGGTTGATGATGACGAAAAGAGAAGGACAACTGAGTTGAACAACAACAGTTGCTGA 1521 0.5082 MSFFSSSKPDSNLATAKAVLSTAASVAATAMVIRSVASELLPPEFMSYVRDGFRSALSRFSSETTMVIEEFDGLVSNQIYEAAETYLGTKISPSSQRLKVTKPETDDTFILTMERNECLDDVFNGVKFNWVLVCRQVETRHFHNPRDLNASLKSEVRSLELRFHKKHKDMVLNTYLPFILKEAKSLKQATKALRIFTVDYNYMYGNPNDAWAGINLDHPATFDTLALERDVKEFVMRDLERFVARKEYYRKVGKAWKRGYLLYGPPGTGKSSLIAAMANYLRFDVYDLELTELQSNSDLRRLLIAMANRSILVVEDIDCTIQFHDRRAQATPSSSANNKDKQVTLSGLLNFTDGLWSSCGDERIIVFTTNHKDKLDPALLRPGRMDVHIHMSYCTPCGFRQLTSNYLGIKEHDLFPQIEEEIQKTQVTPAEVAEQLLKSSDIETCLKQLIDFLIKKKETQELEAKKKEQEAKNKEEQQKEIDDGGKGEEVDDDEKRRTTELNNNSC* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2642 506 ProSitePatterns AAA-protein family signature. 363 381 IPR003960 GO:0005524|GO:0016887
Pvu3g2642 506 Pfam Domain associated at C-terminal with AAA 41 134 IPR025753 -
Pvu3g2642 506 Pfam ATPase family associated with various cellular activities (AAA) 261 392 IPR003959 GO:0005524|GO:0016887
Pvu3g2642 506 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 208 444 IPR027417 -
Pvu3g2642 506 Gene3D - 390 461 - -
Pvu3g2642 506 SMART AAA_5 256 395 IPR003593 -
Pvu3g2642 506 MobiDBLite consensus disorder prediction 463 500 - -
Pvu3g2642 506 Gene3D - 212 389 IPR027417 -
Pvu3g2642 506 PANTHER PROTEIN HYPER-SENSITIVITY-RELATED 4-LIKE 10 483 - -
Pvu3g2642 506 CDD AAA 257 393 - -
Pvu3g2642 506 PANTHER BCS1 AAA-TYPE ATPASE 10 483 - -
Pvu3g2642 506 MobiDBLite consensus disorder prediction 463 506 - -
Pvu3g2642 506 Coils Coil 450 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2642 Pvu-Chr3 48465374 48468034 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2642 221 386 Miscellaneous Gene Families AT3G47060 32.184 1.90e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2642 - K08900 gmx:100788420 736.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2642 3 48465374 48468034 Pvu3g2642 3 48465374 48468034 ECH