Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2623 ATGGCAGCAGAATCATCAGAGGGCGAAGAAGAAACAAAGTTGAGCGGAGGAAACCAATTGCTGATGGTTGACGATGACTTAACGGAGATGGGGAAAAAAGCCGCTTGGAGCGTCAGTTCTTGCAAACCCGGTAACGGTGTTTCCTCTCTCCGTGACGATAACCTCGAAACCTATTGGCAATCCGACGGAGCGCAACCCCATTTGGTTAATATTCAGTTTCAGAAGAAAGTTAGACTTCAACTAATTGTGCTGTACGTGGATTTCAAGCTGGACGAGAGTTACACGCCTAGCAAAGTTTCCATCCGTGCCGGTGATGGGTTTCACAACTTGAAGGAGATTAAGACCGTGGAACTTGTGAAGCCAACTGGGTGGATCTATCTATCGTTGTCTGGAGTTGATCCTAGGGATACCTTTGTGAACACTTTCATGTTGCAAATTGCTGTGTTGTCAAACCATCTCAATGGAAGGGATACTCATGTGCGGCAAATCAAAGTTTATGGGCCTCGACCGAATCCTATTCCACACCAGCCATTTCAATTTACTTCAAGGGAGTTCATCACCTACTCTTCTATAAGATGA 579 0.456 MAAESSEGEEETKLSGGNQLLMVDDDLTEMGKKAAWSVSSCKPGNGVSSLRDDNLETYWQSDGAQPHLVNIQFQKKVRLQLIVLYVDFKLDESYTPSKVSIRAGDGFHNLKEIKTVELVKPTGWIYLSLSGVDPRDTFVNTFMLQIAVLSNHLNGRDTHVRQIKVYGPRPNPIPHQPFQFTSREFITYSSIR* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2623 192 SMART APC10_2 27 191 IPR004939 -
Pvu3g2623 192 ProSiteProfiles DOC domain profile. 6 192 IPR004939 -
Pvu3g2623 192 SUPERFAMILY Galactose-binding domain-like 22 168 IPR008979 -
Pvu3g2623 192 PIRSF APC10 2 192 IPR016901 GO:0005680|GO:0031145
Pvu3g2623 192 Gene3D - 1 169 - -
Pvu3g2623 192 CDD APC10 29 167 IPR016901 GO:0005680|GO:0031145
Pvu3g2623 192 PANTHER ANAPHASE-PROMOTING COMPLEX 10 11 192 IPR016901 GO:0005680|GO:0031145
Pvu3g2623 192 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 10 11 192 - -
Pvu3g2623 192 Pfam Anaphase-promoting complex, subunit 10 (APC10) 19 189 IPR004939 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2623 K03357 - gmx:100526925 387.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2623 3 48265928 48268142 Pvu3g2623 3 48265928 48268142 ECH