Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2616 ATGAGTTTCAGGGAAGAGGGTGGAGATGCAAGGGATCTTCAGAAACCGTTTCTCCACACGGGGAGTTGGTACAAGATGGGTTCGAGGCAGTCCAGCATCATGGGATCCTCTACTCAGGTCATCCGCGATGGCGCTGTCTCTGTCCTCTTCTGCGTCCTCATCGTCGCTTTGGGTCCTATCCAATTCGGCTTCACATGTGGGTATTCTTCTCCAACGCAAGGGGCTATAGTACGCGATCTAAAGCTCTCAGTTTCGGAGTTCTCTTTGTTTGGATCTTTGTCGAATGTGGGAGCGATGGTGGGGGCTATAGCAAGTGGTCAGATAGCTGAATACATAGGGCGCAAAGGGTCGTTGATGATTGCTGCAATTCCCAATATAATAGGGTGGCTTTCTATTTCTTTTGCCAAAGATTCCTCGTTTTTGTTTATGGGGAGGTTGTTGGAAGGTTTCGGCGTTGGGATCATCTCTTATGTGGTTCCTGTATATATAGCTGAGATTGCTCCTCAAAACATGAGAGGTAGCCTTGGATCAGTGAACCAGCTCTCTGTTACAATTGGCATTCTGCTGGCTTATCTGTTGGGCCTTTTTGTCAACTGGAGAGTGCTTGCAATTTTAGGAGTTTTGCCTTGTACAGTATTAATACCTGGGTTATTTTTCATACCAGAATCCCCCAGATGGTTGGCCAAGATGGGGATGACAGATGAGTTTGAGACTTCTTTGCAAGTATTAAGAGGATTTGACACCGACATATCTGTGGAAGTTTATGAAATTAAGAGATCTGTGGCTTCAACAGGAAAAAGAGCTGCAATCCGATTTGCAGATCTCAAGAGGAAAAGATATTGGTTTCCCTTAATGATTGGTATTGGATTACTTGTTCTTCAGCAATTATCTGGCATCAATGGAGTTTTGTTCTATTCAACTACCATCTTTGCAAACGCAGGAATTTCGTCAAGCGATGCTGCTACAGTTGGACTTGGTGCCATTCAGGTCATAGCAACTGGAATTTCCACGTGGCTGGTGGACAAAAGTGGTCGGAGGCTGCTTTTAATAATTTCATCATGTATAATGACAGTTAGCCTTGTCATTGTTTCAACAGCATTCTATCTAGAGGTTAGTAATAGTAATGGTATTGTCTTTATTAAAGGAAAAGAAAGAATAGGGTAA 1164 0.4356 MSFREEGGDARDLQKPFLHTGSWYKMGSRQSSIMGSSTQVIRDGAVSVLFCVLIVALGPIQFGFTCGYSSPTQGAIVRDLKLSVSEFSLFGSLSNVGAMVGAIASGQIAEYIGRKGSLMIAAIPNIIGWLSISFAKDSSFLFMGRLLEGFGVGIISYVVPVYIAEIAPQNMRGSLGSVNQLSVTIGILLAYLLGLFVNWRVLAILGVLPCTVLIPGLFFIPESPRWLAKMGMTDEFETSLQVLRGFDTDISVEVYEIKRSVASTGKRAAIRFADLKRKRYWFPLMIGIGLLVLQQLSGINGVLFYSTTIFANAGISSSDAATVGLGAIQVIATGISTWLVDKSGRRLLLIISSCIMTVSLVIVSTAFYLEVSNSNGIVFIKGKERIG* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2616 387 ProSitePatterns Sugar transport proteins signature 2. 147 172 IPR005829 GO:0016021|GO:0022857|GO:0055085
Pvu3g2616 387 ProSitePatterns Sugar transport proteins signature 1. 105 122 IPR005829 GO:0016021|GO:0022857|GO:0055085
Pvu3g2616 387 Gene3D MFS general substrate transporter like domains 43 381 IPR036259 -
Pvu3g2616 387 ProSiteProfiles Major facilitator superfamily (MFS) profile. 51 387 IPR020846 GO:0022857
Pvu3g2616 387 PANTHER MAJOR FACILITATOR, SUGAR TRANSPORTER, MAJOR FACILITATOR SUPERFAMILY-RELATED 14 373 - -
Pvu3g2616 387 SUPERFAMILY MFS general substrate transporter 50 366 IPR036259 -
Pvu3g2616 387 PRINTS Sugar transporter signature 59 69 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu3g2616 387 PRINTS Sugar transporter signature 142 161 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu3g2616 387 PRINTS Sugar transporter signature 294 304 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu3g2616 387 CDD MFS_GLUT6_8_Class3_like 49 370 IPR044775 GO:0008643|GO:0051119
Pvu3g2616 387 Pfam Sugar (and other) transporter 52 380 IPR005828 GO:0016021|GO:0022857|GO:0055085
Pvu3g2616 387 PANTHER - 14 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2616 Pvu-Chr3 48200932 48205072 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2616 1 370 Organic Solute Cotransporters AT1G75220 82.480 0.0 622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2616 K03444 - gmx:100813399 686.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2616 3 48200932 48205072 Pvu3g2616 3 48200932 48205072 ECH