Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2611 ATGTGGCGAAGGAGCTTCAGCAGCAGCACCCCCACCGCCACCGCCACTCTCAAGGGCAAGAAATGGGACGCGCTGATAATCGGCGGTGGCCACAACGGCCTCACAGCGGCGGCTTACCTCGCGCGCGGAGGCCTGTCAGTGGCAGTCCTGGAGCGCCGCCACGTGATCGGAGGCGCCGCCGTGACAGAGGAGCTTATTCCGGGGTTCAAGTTTTCGCGGTGCAGTTACCTCCAAAGCCTTTTGAGACCGTCCGTTATAAAGGAGCTGGAGTTGGGGAAGCACGGCTTGAAGCTTCTGAAGCGCAATCCGTCGTCATTCACGCCCTGCCTCGACGGACGCTACCTTCTATTAGGACCCGATAAGCAGCTCAACCACTCTGAGATATCCAAATTCTCGCTCGCAGATGCTGAGGCTTATCCAAGATACGAGAGTCAGCTTGAGAACTTCTGTAAGTTCATGGATCTAGTGCTGGATTCGCCTCCACCTGAATCTGTGCAGCATAAATTGTCTATTAATGAAAAGTTGAAGAATAAAATACAGAATTCAGTATTTTGGGCGAGTTGTCTGCGGCATGTGTCTTCCATGGGACAAAAGGATATGGTGGACTTCATGGACCTTCTGTTGTCCCCAGCTTCTAAAGTGTTGAATAACTGGTTTGAGGCAGATGTTCTGAAGGCAACCCTTGCAACTGATGCTGTGATAGGCAGTACGGCCAGTGTCCACACCCCAGGAAGTGGCTATGTTCTGCTACATCATGTGATGGGAGAAACTGATGGGGAACGTGGGATTTGGTCATATGTTGAAGGTGGAATGGGCTCAATATCCAAGGCTATTGGTAATGCTGCTATTGAAGCTGGAGCGCATGTTGTAACCAATGCTGAGGTGTCTCGGTTGTTGATTGAAAATTCTAGCACTGTCTGTGGGGTGACTCTGGCTGATGGTACTGAAGTGCATTCTTCAATTGTTTTGTCCAATGCAACTCCATATAAAACTTTCATGGAATTAGTGCCTGACGATGTACTCCCCAATGATTTTGTCCGTGCCATTAAGCACTCTGACTACAGTTCTGCCACTACAAAAATAAATGTAGCTGTTGATAAATTGCCTGAATTTCGCTGTTGCAAGTTGGATCATCCTCATGCTGGTCCACAGCACGTCGGCACAATTCATATAGGTTCAGAAAGCATGGAGGAGATTCACTCCGCTTGTCAAGATGCAGCAAGTGGAACACCATCGAGAAGACCGGTTATTGAGATGACAATTCCCTCCGTACTGGACAAAACTATTTCTCCACCTGGTAAGCATGTAATCAACCTGTTTGTGCAGTACACACCCTACAAACCATTGGATGGTGACTGGCAAGATCACAAATACAGAGAATCGTTTGCACAAAAATGCTTCACGTTGATTGATGAATATGCTCCTGGCTTCAGCACATCAGTCATCGGTTATGACATGCTGACTCCACCAGACCTTGAAAGGGTAATCGGTTTGACAGGAGGGAATATATTCCATGGGGCTATGGGGTTGGATTCCCTTTTCCTCATGCGACCTGCAAAGGGGTGGTCAAACTACAAGACTCCGCTTCAAGGGTTATACTTGTGCGGAAGTGGAGCACATCCTGGTGGTGGAGTTATGGGAGCACCTGGACGTAACGCTGCTCGTTTAGCTCTTCAAGATATTAGAGAAAGAACTTAA 1698 0.4859 MWRRSFSSSTPTATATLKGKKWDALIIGGGHNGLTAAAYLARGGLSVAVLERRHVIGGAAVTEELIPGFKFSRCSYLQSLLRPSVIKELELGKHGLKLLKRNPSSFTPCLDGRYLLLGPDKQLNHSEISKFSLADAEAYPRYESQLENFCKFMDLVLDSPPPESVQHKLSINEKLKNKIQNSVFWASCLRHVSSMGQKDMVDFMDLLLSPASKVLNNWFEADVLKATLATDAVIGSTASVHTPGSGYVLLHHVMGETDGERGIWSYVEGGMGSISKAIGNAAIEAGAHVVTNAEVSRLLIENSSTVCGVTLADGTEVHSSIVLSNATPYKTFMELVPDDVLPNDFVRAIKHSDYSSATTKINVAVDKLPEFRCCKLDHPHAGPQHVGTIHIGSESMEEIHSACQDAASGTPSRRPVIEMTIPSVLDKTISPPGKHVINLFVQYTPYKPLDGDWQDHKYRESFAQKCFTLIDEYAPGFSTSVIGYDMLTPPDLERVIGLTGGNIFHGAMGLDSLFLMRPAKGWSNYKTPLQGLYLCGSGAHPGGGVMGAPGRNAARLALQDIRERT* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2611 565 PANTHER PHYTOENE DEHYDROGENASE 1 564 - -
Pvu3g2611 565 PANTHER FAD/NAD(P)-BINDING DOMAIN-CONTAINING PROTEIN-RELATED 1 564 - -
Pvu3g2611 565 Gene3D - 21 112 IPR036188 -
Pvu3g2611 565 Coils Coil 558 565 - -
Pvu3g2611 565 Pfam Flavin containing amine oxidoreductase 33 366 IPR002937 GO:0016491
Pvu3g2611 565 Gene3D - 223 369 IPR036188 -
Pvu3g2611 565 SUPERFAMILY FAD/NAD(P)-binding domain 21 440 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2611 Pvu-Chr3 48148049 48155398 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2611 - - gmx:100781247 1077.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2611 3 48148049 48155398 Pvu3g2611 3 48148049 48155398 ECH