Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2601 ATGAGACATAGGATTTCGTATTTGATGGACGAGATCTGGGAGAGGGCTGTGGAGACGGCGTTAGACGGCGAGAAGGACCACGCGTCCGCCCGGACGCTAACCCTAGACGGCGCCGTTAAGTGCGTGCAAGGACGGTTACCTCCTCCAAGCCTTCTTGAAAGGTTCCAGAACCTTCAGCACCTTTCCATCGCAAACGTCGGTGTTTCAACGTTGGAGCAGTTTCCACGGCTCCGGAGTCTGCAAAAGCTGAACCTCTCCGACAACCGGATCGCCGGTGGGTTGGAGTTTCTAGTCCAGGCTGGCCTCGATTCGCTGCGTGACCTTGATTTGTCGAACAATCGGATTCAGTACATTGAGGATCTCGCGCCGCTGGCGCAGGTGAAGCTGGTTTCGCTGGATCTGTACGAGTGTCCCGTGACGCGCGTGAAGGATTATCGATCTAGGGTTTTTGGGTTGATTAAATCGCTCAAGTACTTGGATAAGATGGATGCGGAGGAGAACGAGAGGCCTGAGAGTGATGACGAGGAAGAGGAGGAAGAAGACGAGGAGGAGGAGGATGACCCTGGGAGTGGCGAGATTGATGGAGAAGAAGATCGACCGCTTGGGATTAACAATGGACACAGCGAGGGTGTTGATGGTGTTGTTGATGCTGATGAGGAGGAAGAGAGTGATGCGGATGAGGAGGAGACGGAGACGTCGAGGCGGGTTACTAATGGCGAGAATCATAGGGAGAATGGGTTCCGTGTCGTGCCGGTAGAGGGGGATGACGTGGAGGAGGACGATGAGGATGATGATTCTGGTGAGGAGATTGATGAGGAGGAGGGAGATGATGATGATGTTGTGGAGGTTCATGAGATTGAGGATAGCGATGATGAGGATGGAGTTGAGTATGATGAGGATGATGATGATGATGATGACGATGAGGAGGAAGTGGATAATGATGAGGGTGATTTTGCGGAGCCGGAGAGTACTGGGAGGTTAACGAGTACGGAGGGGGAGATTGATGGGCATGAGCAGGGCGAGGAGGATGGAGATGAAGATGATAATGGGGAGACTGGGGAAGATGAGATGGGGGTTGAAGATGATGGCGATTATGAAGATGATGATGAAGAAGAAGACTATGGTGGTGGCTACCTTGTTCAGCCAGTTGGACAGTCGGATGCCCTCAATGCTGGAGTTGTTGGAGATGTAGATGGTGCAAATGATGATGGTGATGAGGAGGATGAGGTTGATGATGAGGATGAAGATGTTCAGGTATTGCCTCCTGAATCTTCCCACCTGAAGAGAAAGAGGAATGATGAAGAAGAGGATGATGAGGAGAGTGATGATGAAGAAGATGTGGTAGCATTCACGAAGTCATCCAAGAAGCACCATTGA 1377 0.5149 MRHRISYLMDEIWERAVETALDGEKDHASARTLTLDGAVKCVQGRLPPPSLLERFQNLQHLSIANVGVSTLEQFPRLRSLQKLNLSDNRIAGGLEFLVQAGLDSLRDLDLSNNRIQYIEDLAPLAQVKLVSLDLYECPVTRVKDYRSRVFGLIKSLKYLDKMDAEENERPESDDEEEEEEDEEEEDDPGSGEIDGEEDRPLGINNGHSEGVDGVVDADEEEESDADEEETETSRRVTNGENHRENGFRVVPVEGDDVEEDDEDDDSGEEIDEEEGDDDDVVEVHEIEDSDDEDGVEYDEDDDDDDDDEEEVDNDEGDFAEPESTGRLTSTEGEIDGHEQGEEDGDEDDNGETGEDEMGVEDDGDYEDDDEEEDYGGGYLVQPVGQSDALNAGVVGDVDGANDDGDEEDEVDDEDEDVQVLPPESSHLKRKRNDEEEDDEESDDEEDVVAFTKSSKKHH* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2601 458 Coils Coil 162 182 - -
Pvu3g2601 458 MobiDBLite consensus disorder prediction 214 228 - -
Pvu3g2601 458 PANTHER ACIDIC LEUCINE-RICH NUCLEAR PHOSPHOPROTEIN 32 14 454 IPR045081 -
Pvu3g2601 458 MobiDBLite consensus disorder prediction 399 418 - -
Pvu3g2601 458 SUPERFAMILY L domain-like 48 164 - -
Pvu3g2601 458 MobiDBLite consensus disorder prediction 167 193 - -
Pvu3g2601 458 MobiDBLite consensus disorder prediction 336 375 - -
Pvu3g2601 458 MobiDBLite consensus disorder prediction 163 458 - -
Pvu3g2601 458 MobiDBLite consensus disorder prediction 254 318 - -
Pvu3g2601 458 MobiDBLite consensus disorder prediction 229 253 - -
Pvu3g2601 458 MobiDBLite consensus disorder prediction 419 435 - -
Pvu3g2601 458 ProSiteProfiles Leucine-rich repeat profile. 104 125 IPR001611 GO:0005515
Pvu3g2601 458 Pfam Leucine-rich repeat 64 174 - -
Pvu3g2601 458 Gene3D Ribonuclease Inhibitor 10 175 IPR032675 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2601 - - gmx:100809629 464.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2601 3 48066808 48070488 Pvu3g2601 3 48066808 48070488 ECH