Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2599 ATGGAGCAAGGTGGCAGAGAAGACCAGACGACGACGTTCAACAAATATGCCTTTGCTTGTGCTGTAGTTGCTTCAATGGTTTCCATCATATCTGGTTATGATACGGGTGTTATGAGTGGAGCAATGATATTCATCAAGGATGATATTGGAATCAGCGATACCCAGCAAGAGGTTCTTGCAGGAATCTTGAACCTATGCGCATTGGTAGGATCCTTAGCTGCAGGAAGAACCTCTGATTACATTGGTCGTCGCTACACAATTTTCTTAGCCTCCGTCCTCTTCATGGTGGGTGCAGTTGTGATGGGGTATGGCCCAAACTATGCAATATTAATGCTTGGAAGGTGTGTTGGTGGGGTGGGTGTGGGTTTTGCTCTAATGATAGCACCAGTTTACTCAGCAGAGATTTCCTCTGCATCATCCAGGGGTTTTCTAACCTCTTTGCCCGAGCTTTGTATCGGCATTGGCATCTTACTCGGCTACGTATCAAACTTCTTCTTGGGGAAATTGACCTTGAAGCTTGGATGGAGGTTGATGCTTGGTGTTGCTGCACTTCCTTCACTTGCTTTGGCTCTGGTTGTTCTAGCAATGCCAGAGTCGCCAAGGTGGTTAGTGATGCAGGGTCGTTTGGAAGGTGCGAAGAAGGTGCTATTGAAAGTTTCAAACAGCAGAGAAGAGGCTGAACTTCGGTTGAGGGAAATAAAAGTGGCGGTAGGGTTTGATGAGAATTGTGGCAGTGATGAAAATGTGAAGGTGCCTCAGAAGTCACAGGGTGAAGGGGTTTGGAAAGAGTTGCTTGTGAGGCCCACACCGGAAGTTCGCTGGATGGTGATTGCAGCGATAGGGATTCATTTTTTCGAGCATGCAACTGGCATTGAAGCTGTGATGTTGTACAGTCCCAGAATCTTTAAGAAAGCTGGTGTGAGAAGTAAGGATAAGCTCTTACTTGCGACTGTTGGAATTGGCCTGACAAAGATAGTTTTCTTGGTGATGGCTTTGTTTTTGCTTGACAGAGTTGGTAGAAGGCGCCTCTTGCAAGTAAGCACTGGGGGAATGATTTGTGGGCTCACACTTTTGGGTTTTAGTTTGACCATGGTTGATCATTCTAGTGAGAAGCTGTTGTGGGCATTGAGCCTTAGCATTGTGGCCACATATGCTTATGTTGCTTTCTTTAACATTGGGCTTGGGCCTGTCACTTGGGTCTACAGCTCGGAGATATTTCCTTTGAGGTTGAGGGCGCAAGGGGCGAGCATAGGAGTTGCAGTGAATAGAACCATGAATGCTGTGGTTTCCATGAGTTTTATTTCAGTCTACAAAGCAATCACCATTGGTGGAAGCTTTTTCATGTTCGCTGCTGTATCTATACTTGCTTGGTTCTTCTTTTACTTTTTCCTTCCTGAAACCAAAGGCGTGCCCCTGGAAGAGATGGAAATGCTTTTTACCAAAGTATTCAGCGGTCAAAATGTAGTCAAGAAAACTGATCCCAGATAG 1488 0.457 MEQGGREDQTTTFNKYAFACAVVASMVSIISGYDTGVMSGAMIFIKDDIGISDTQQEVLAGILNLCALVGSLAAGRTSDYIGRRYTIFLASVLFMVGAVVMGYGPNYAILMLGRCVGGVGVGFALMIAPVYSAEISSASSRGFLTSLPELCIGIGILLGYVSNFFLGKLTLKLGWRLMLGVAALPSLALALVVLAMPESPRWLVMQGRLEGAKKVLLKVSNSREEAELRLREIKVAVGFDENCGSDENVKVPQKSQGEGVWKELLVRPTPEVRWMVIAAIGIHFFEHATGIEAVMLYSPRIFKKAGVRSKDKLLLATVGIGLTKIVFLVMALFLLDRVGRRRLLQVSTGGMICGLTLLGFSLTMVDHSSEKLLWALSLSIVATYAYVAFFNIGLGPVTWVYSSEIFPLRLRAQGASIGVAVNRTMNAVVSMSFISVYKAITIGGSFFMFAAVSILAWFFFYFFLPETKGVPLEEMEMLFTKVFSGQNVVKKTDPR* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2599 495 TIGRFAM SP: MFS transporter, sugar porter (SP) family 14 475 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu3g2599 495 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 9 486 IPR045262 GO:0015144
Pvu3g2599 495 ProSitePatterns Sugar transport proteins signature 1. 331 348 IPR005829 GO:0016021|GO:0022857|GO:0055085
Pvu3g2599 495 PANTHER POLYOL TRANSPORTER 3-RELATED 9 486 - -
Pvu3g2599 495 ProSitePatterns Sugar transport proteins signature 2. 116 141 IPR005829 GO:0016021|GO:0022857|GO:0055085
Pvu3g2599 495 Gene3D MFS general substrate transporter like domains 9 482 IPR036259 -
Pvu3g2599 495 PRINTS Sugar transporter signature 28 38 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu3g2599 495 PRINTS Sugar transporter signature 111 130 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu3g2599 495 PRINTS Sugar transporter signature 286 296 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu3g2599 495 PRINTS Sugar transporter signature 380 401 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu3g2599 495 PRINTS Sugar transporter signature 403 415 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu3g2599 495 ProSitePatterns Sugar transport proteins signature 1. 74 91 IPR005829 GO:0016021|GO:0022857|GO:0055085
Pvu3g2599 495 SUPERFAMILY MFS general substrate transporter 9 476 IPR036259 -
Pvu3g2599 495 Pfam Sugar (and other) transporter 20 479 IPR005828 GO:0016021|GO:0022857|GO:0055085
Pvu3g2599 495 ProSiteProfiles Major facilitator superfamily (MFS) profile. 20 468 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2599 Pvu-Chr3 48054449 48056759 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2599 7 479 Organic Solute Cotransporters AT2G18480 71.247 0.0 666
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2599 - - var:108328789 866.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2599 3 48054449 48056759 Pvu2g0294 2 2994235 2996300 ECH
Pvu3g2599 3 48054449 48056759 Pvu3g2599 3 48054449 48056759 ECH
Pvu2g0291 2 2975420 2977297 Pvu3g2599 3 48054449 48056759 PCT
Pvu3g2599 3 48054449 48056759 Pvu2g0293 2 2986300 2988230 PCT