Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2597 ATGGCAGCTTCCGCTTCCAATGCTGTTCTTCTCGGAGACGTCTACTTCGACGAAGTCGCCGCCAAGCCCTCCGGCGTTCGCTTCCGGGACAGGACGCGCCGCACCGCTTTGCGAGCTACCGTCAATCTCACAAGATTGCAACCCTTGAACAGTCTCTTGAACTTCGGGTGCTCCACCTCCGATGCAACTTGGAGGAGTTGGAGTCCGAGCTCGCTCCTTGTCGGAACCAAGCACTCCTCCTTTCCTTGCTGCTCCGCCGAGACAACGCCTCATGTTCAACACCTTGCCTCCTCCACATTTTCATTCGACCAAACAAATTTTGGTGTCGAGAGGTTGAAGTTGTTTTCGGGGTCATGTTACCTACCACATCCGGATAAGGAGGACTATGGTGGAGAGGATGCACATTTCATTTGTGTAGAGGAACAAACAATTGGTGTTGCAGATGGTGTTGGTGGCTGGGCAGATGTTGGTGTTAATGCTGGACTGTTTGCTCAAGAACTCATGTCCCATTCTGTTAGAGCAATTGAAGAGGGACCAAAAGGTCCTGTTGATCCCGCCAGTGTTTTAGAGAAGGCTCACTCTTGTACAAAGGCCAAGGGTTCATCAACAGCTTGTATCATTGCTCTTACTGATACGGGACTGCATGCCATTAATTTGGGTGACAGTGGGTTCATTGTGATTAGAGATGGATGCACCATTTTCAAGTCCCCTGTTCAACAGCATGACTTCAATTTTACGTATCAACTGGAGAGTGGCGATGGATGTGATCTACCCAGCTCTGGTGAGGTATTTACAATATCTGTTGCACCAGGAGATGTTGTCGTTGCTGGAACAGATGGATTGTTTGACAATCTGTACAACGATGAGGTAGCTGAAGTTGTTTTGAATGCAGTTAGAGCTGGACTAGAACCCCAAGTAACTGCTCAGAAGATAGCAGCACTGGCTCGTCAGAGGGCACTGGACAGGAATAGGCAGTCACCTTTTTCTGCTGCCGCTCAAGAGGCTGGGTTCAATTATTATGGTGGGAAGCTTGATGACATAACAGTTGTTGTGTCATACATAACTGGCTCAACATGTTGA 1080 0.487 MAASASNAVLLGDVYFDEVAAKPSGVRFRDRTRRTALRATVNLTRLQPLNSLLNFGCSTSDATWRSWSPSSLLVGTKHSSFPCCSAETTPHVQHLASSTFSFDQTNFGVERLKLFSGSCYLPHPDKEDYGGEDAHFICVEEQTIGVADGVGGWADVGVNAGLFAQELMSHSVRAIEEGPKGPVDPASVLEKAHSCTKAKGSSTACIIALTDTGLHAINLGDSGFIVIRDGCTIFKSPVQQHDFNFTYQLESGDGCDLPSSGEVFTISVAPGDVVVAGTDGLFDNLYNDEVAEVVLNAVRAGLEPQVTAQKIAALARQRALDRNRQSPFSAAAQEAGFNYYGGKLDDITVVVSYITGSTC* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2597 359 SMART PP2C_SIG_2 128 354 IPR001932 -
Pvu3g2597 359 Pfam Stage II sporulation protein E (SpoIIE) 144 352 IPR001932 -
Pvu3g2597 359 SUPERFAMILY PP2C-like 119 352 IPR036457 -
Pvu3g2597 359 PANTHER PROTEIN PHOSPHATASE 1 358 - -
Pvu3g2597 359 PANTHER PROTEIN PHOSPHATASE 2C 1 358 IPR039123 -
Pvu3g2597 359 Gene3D - 126 251 IPR036457 -
Pvu3g2597 359 SMART PP2C_4 109 352 IPR001932 -
Pvu3g2597 359 ProSiteProfiles PPM-type phosphatase domain profile. 118 354 IPR001932 -
Pvu3g2597 359 Gene3D - 257 358 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2597 Pvu-Chr3 48016266 48025242 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2597 K17508 - gmx:100784475 588.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2597 3 48016266 48025242 Pvu3g2597 3 48016266 48025242 ECH
Pvu3g2597 3 48016266 48025242 Pvu2g0288 2 2942756 2946168 ECH
Pvu2g0288 2 2942756 2946168 Pvu3g2597 3 48016266 48025242 PCT