Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2587 ATGTCCGGCAACTCCCAATATTGTCAATTCCACACTTTTCACTCTCTCAGTTTCCAAGTCCAACCTTTTCCAAGTTCCAACCGGACTGAACCACGAAATGTGAAACCACGGTTCACGATGCCCAAGGCGCCACCGCCCCTAATCTACTATCTGTCGGAGCACCCCTCTATCGTGGGGTTCCGGTGGAGCCATGCCCAATCATGGGGCGCCACGTGGTCCTTCCTCTTCTCCTCCATCGCCTCCTACATCCTCCTCTCCCTCTTCCTCCACCTCTCGCTTACTCTTTTCCGCCGCCACCGTCCCATCCCCATCGGCCCCCTCCCGGCACTTCACAGCCTCTTCATGTCGCTCACCTCCGTCACCATCTTCGCCGGAATCCTAATATCGACAGCCGCCGAGATCCGCGACACGCGATGGTTCTGGCGGCGGTCCAAAACCCCCTTGGAGTGGCTCCTCTGCTTCCCGCTGGGAACCCGCCCCTCCGGCCGCGTCTTCTTCTGGTCCTACGTGTACTACCTCTCCCGCTTCCTCCACATGTTCCGAACCCCTCTCATCATCCTACGACGCCGCAGGTTGTCGTTTTTCCACCTCCTGAACCACTCCATCTCCGCTTTGGCCTCCTTCCTCTGGCTGGAGTTCTCGCAATCCTTTCAGGTCCTGGCCATCCTCTTCGCCACACTGGTCTACGCCCTCGTTTACGCCTACAGGTTCTGGACCGCCATAGGCCTGCGCGGCGCCTGCTTCCCCTTCGTCCTCAACTGCCAGATCGCGCTCCTCGCTTGCAATGTGGCGTGCCACGTCGGCGTCTTCTTCCTCCACTTTTTCTTCAAAGGCGGCTGCAACGGGATTGGCGCGTGGCTCTTCAACTGCGTCCTCAACCTCGCTCTTCTCATGCTTTTTCTCAACTTCTACGTCAGGATCTACGTCGGGAAAAGGAGAATGCTGAGGGGTGTTACACCTGCGCTTTCCAAAGCGCGTGAACTTCAACGCTGA 993 0.5811 MSGNSQYCQFHTFHSLSFQVQPFPSSNRTEPRNVKPRFTMPKAPPPLIYYLSEHPSIVGFRWSHAQSWGATWSFLFSSIASYILLSLFLHLSLTLFRRHRPIPIGPLPALHSLFMSLTSVTIFAGILISTAAEIRDTRWFWRRSKTPLEWLLCFPLGTRPSGRVFFWSYVYYLSRFLHMFRTPLIILRRRRLSFFHLLNHSISALASFLWLEFSQSFQVLAILFATLVYALVYAYRFWTAIGLRGACFPFVLNCQIALLACNVACHVGVFFLHFFFKGGCNGIGAWLFNCVLNLALLMLFLNFYVRIYVGKRRMLRGVTPALSKARELQR* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2587 330 Pfam GNS1/SUR4 family 71 312 IPR002076 GO:0009922|GO:0016021
Pvu3g2587 330 PANTHER FATTY ACID ACYL TRANSFERASE-RELATED 41 315 IPR002076 GO:0009922|GO:0016021
Pvu3g2587 330 PANTHER GNS1/SUR4 MEMBRANE FAMILY PROTEIN 41 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2587 Pvu-Chr3 47862343 47863768 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2587 47 293 Acyl Lipid Metabolism Gene Families AT4G36830 65.737 1.14e-114 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2587 - - pvu:PHAVU_003G251300g 639.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2587 3 47862343 47863768 Pvu3g2587 3 47862343 47863768 ECH
Pvu3g2587 3 47862343 47863768 Pvu2g0267 2 2800307 2801820 ECH
Pvu2g0267 2 2800307 2801820 Pvu3g2587 3 47862343 47863768 PCT