Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2586 ATGGCACCAAGCACCTCATTTTCCTTCTTCTTCCTCTTCTTCTTCACATTTCAATATACCATCCTCGTCTTCTCCACCACCACCACCCAACAACGCTTTAAAGAAGCTCCAAAGTTCTACAACTTCCCCACATGCCAGACCTTGCAGCACCACCCGAATCACACGTGCCCCATGAATGCAGTCCACGTGGCAATGACCCTGGACGTGGCGTACCTCCGAGGGTCCATGGCAGCAATCTTCTCCGTGCTCCAACATAGCTCATGTCCGGAAAACGTAATCTTCCACTTCGTCTCCGCAGCTTCCCAACCTTCCTCCTTCGCAACTCTAAACCAAACATTAACCATTTCCTTTCCTTACTTGAATTTCCGAATCTATCCTTTCGACGACGACGCCGTTTCGCGCCTCGTCTCCACCTCCATACGCTCAGCGCTGGACACGCCCCTCAACTACGCCCGAAGCTACCTTGCAAATATCCTCCCTCGCTGCGTCGTCAGAGTCGTCTACCTTGATTCAGACTTAATCCTTGTTGACGACATTGCCAAACTCGCCGCCACGTCGCTCGGCGACACGGAGGTCCTAGCCGCGCCGGAATACTGCTCCGCTGACTTCTCGGCCTACTTCACGCCCTCGTTCTGGGCCAACCCCTCGCTCTCGCTCTCGTTCTCGAACCGGACGCGGCCGTGCTACTTCAACACCGGCGTAATGGTGATAGACCTACAGCGGTGGCGCGAGGGAGACTACACAACGGCGATCGAAGAGTGGATGGAGCTGCAGAAGAGGATGCGGATCTACGAGCTCGGGTCCCTTCCGCCGTTCCTGCTGGTTTTCGCCGGGAGGATTGCGGCGGTGGATCGTCGGTGGAATCAGCACGGGCTCGGCGGGGATAATTTTCGTGGGCTTTGTCGGGAACTGCATCCTGGGCCTGTGAGCCTGATGCATTGGAGTGGGAAGGGGAAGCCTTGGGCCAGGCTCGACGCCAACATGCCTTGCCCTTTGGACGCGTTGTGGGCTCCCTACGATCTGCTCCAAACTCATTATGCTCTTCAGGCGTAG 1053 0.5641 MAPSTSFSFFFLFFFTFQYTILVFSTTTTQQRFKEAPKFYNFPTCQTLQHHPNHTCPMNAVHVAMTLDVAYLRGSMAAIFSVLQHSSCPENVIFHFVSAASQPSSFATLNQTLTISFPYLNFRIYPFDDDAVSRLVSTSIRSALDTPLNYARSYLANILPRCVVRVVYLDSDLILVDDIAKLAATSLGDTEVLAAPEYCSADFSAYFTPSFWANPSLSLSFSNRTRPCYFNTGVMVIDLQRWREGDYTTAIEEWMELQKRMRIYELGSLPPFLLVFAGRIAAVDRRWNQHGLGGDNFRGLCRELHPGPVSLMHWSGKGKPWARLDANMPCPLDALWAPYDLLQTHYALQA* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2586 350 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 62 329 IPR029044 -
Pvu3g2586 350 Pfam Glycosyl transferase family 8 62 323 IPR002495 GO:0016757
Pvu3g2586 350 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 6 350 - -
Pvu3g2586 350 SUPERFAMILY Nucleotide-diphospho-sugar transferases 61 341 IPR029044 -
Pvu3g2586 350 PANTHER HEXOSYLTRANSFERASE 6 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2586 Pvu-Chr3 47842178 47843230 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2586 14 348 Glycosyltransferase AT3G50760 66.864 5.31e-171 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2586 K20893 - gmx:100805007 578.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2586 3 47842178 47843230 Pvu3g2586 3 47842178 47843230 ECH
Pvu3g2586 3 47842178 47843230 Pvu2g0265 2 2786747 2788662 ECH
Pvu2g0265 2 2786747 2788662 Pvu3g2586 3 47842178 47843230 PCT