Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2578 ATGGCAGGAATTAGGCTTACCAGGATGGAGCAAGGCCAAACCAAGATAAAAAATGTTCCAATAGCTGTGACCCCAGAAGGGTTTTGGTGCTGCCCTTCTCCTGTGGTGTTTCAGAAAAGCCTCAAGGCTCAGAATCCTCTCAATAAGCCCAAACCCTCTTCACCCCCACCAAAAAGCAGTGTTAAGAAAAAGCCCGTGTCTGTGCCAGTGTATGAGAGGAGAACTGTTACAGCTGCAGATGCCCCTTCAAGATTGGTGCTTTCTGATGATCAGCAATGTGCAACTGCTCCAGAAAGACCTCCTCCACCTACTTCATCTATGGCTGCTGCAGAAAGGGGACCCAGGCCAAAGATTGAATCTTTGCCAAAGAAGGTTGCTATTGAGTTTGGTGAACCTGGAACTTGTGATATGAAAGTGATTTTGCTTGGGAAGCAGGGATTTTGTGTTAAGTTAAGTGTGCACAGGAATGTTCTGACTGAGAAGAGTAGCTTCTTCTCTGAAAAACTATCTGAACAATCGGGTCTGTCTTGTCTCCAAATCGGTGAATGTGAGGATGTTGAGATATATGTTGAAACTGTTGGTCTTATGTACTGCAAGGAGATGAAGCAGCGGCTTATGAAGCAAAGTGTTTCTCGCATTCTTCGAATACTTAAGGTAGCAGAATTCCTTGGCTTCATCTCATGCATCCAATCATGTTTGGAGTTCTTGGAAGCAGTCCCTTGGGTTGGAGAAGAAGACGAAGAAAAGGTGGTGTCAACTGTGCTACAACTCCAAGCAGAAGGAATTGGAGTCAACCCTGTGCTGAAACGAGTTTCAGCTGACATTTCTAATGTCCCAAAAGACACTCTTTCCCACATCATCGACCTTGTTCTGAAAAGCAACGAGGAAAGAAGCCGCCGAGAGATGAAATCCATTGTTCTAAAGCTCCTCAGGGAGAACAACAGTCTTCCAAGCTATGCGCGTACAACCGACATATGCAATGACACCATTTACAGATCATGCAGAACCTGCTTGGACTCATTACTAGAACTGTTCAAGCAGGCTGCAGAACCCAGTGAGGACCGAGATCCTCTAGCAAAGAGCATAGCTCTTGAAGCTGATAACTTAACGTGGTTGCTTGAGATTTTAGTTGACAAACAAGCTGCTGATGAGTTTGCACTGATGTGGGCAAACCAACAAGAACTGGCTGTGTTACATGCAAAGCTGCCAACGGTGTCACGCTACTGTGTTAGCTGCCTTTCTGGGAGACTCTATGTTGGCATTGGGAGAGGGGAGTTGCTTCCATCGAAGGACACTCGCAGGTTGTTGCTACAAACATGGCTGCAACCTCTGATGAATGACTACAACTGGCTGCAGCATGGATGCAGGTCATTTGATAGGAAACTTGTGGAAGAAGGAATTGGGAGGACTATTCTCACCTTGCCTCTGGAGGATCAACAGAGCATTTTGCTTTCATGGTGTGGGAGTTTCTTGAAAACTGGTGATAGCTGTCCCAATCTTCAAAGGGCATTTGAGGTGTGGTGGAGGAGAACTTTCATTAGGCCTTATGTGGAGAACCTAGGTAAGGTTGCTGTGTCAGATAGTTCAAAATTTGCAGAAGGAGAGAAGGAGACTCGAATGAAGGAACAAGAGAATTACTGA 1641 0.4564 MAGIRLTRMEQGQTKIKNVPIAVTPEGFWCCPSPVVFQKSLKAQNPLNKPKPSSPPPKSSVKKKPVSVPVYERRTVTAADAPSRLVLSDDQQCATAPERPPPPTSSMAAAERGPRPKIESLPKKVAIEFGEPGTCDMKVILLGKQGFCVKLSVHRNVLTEKSSFFSEKLSEQSGLSCLQIGECEDVEIYVETVGLMYCKEMKQRLMKQSVSRILRILKVAEFLGFISCIQSCLEFLEAVPWVGEEDEEKVVSTVLQLQAEGIGVNPVLKRVSADISNVPKDTLSHIIDLVLKSNEERSRREMKSIVLKLLRENNSLPSYARTTDICNDTIYRSCRTCLDSLLELFKQAAEPSEDRDPLAKSIALEADNLTWLLEILVDKQAADEFALMWANQQELAVLHAKLPTVSRYCVSCLSGRLYVGIGRGELLPSKDTRRLLLQTWLQPLMNDYNWLQHGCRSFDRKLVEEGIGRTILTLPLEDQQSILLSWCGSFLKTGDSCPNLQRAFEVWWRRTFIRPYVENLGKVAVSDSSKFAEGEKETRMKEQENY* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2578 546 MobiDBLite consensus disorder prediction 44 68 - -
Pvu3g2578 546 MobiDBLite consensus disorder prediction 87 115 - -
Pvu3g2578 546 PANTHER BTB/POZ DOMAIN PROTEIN 1 523 - -
Pvu3g2578 546 Gene3D Potassium Channel Kv1.1; Chain A 122 239 IPR011333 -
Pvu3g2578 546 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 1 523 IPR038920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2578 Pvu-Chr3 47722920 47727750 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2578 - - pvu:PHAVU_003G250400g 1055.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2578 3 47722920 47727750 Pvu3g2578 3 47722920 47727750 ECH
Pvu2g0252 2 2613604 2617972 Pvu3g2578 3 47722920 47727750 PCT