Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2575 ATGCTTCAGGGCATGGGGCATGAAGGGTTGATTCCAAGCCACAAGCGTTCAAAGAGCTTTCCTGAAAAGAAAAGAATGGAGGATGATAATGCAGATAACCACCTTGAGACCTCAGATCGAACAAAGCTGGATACTGGGTACCTCACAGAATGCGGTAAGCCTAGGAAAAAACGAACTCCTGCAAATGACGTTCAACTTACACTGAAGCAAGAGATTTTACTATTAGAGAAAAGACTACAAAATCAATTTGAGGTCAGATGCACGTTAGAAAAGGCTCTTGGATACAGACCTGCATCTCTTGTTACATCAAATGACATGATACTGCCTAAGCCAACGTCCAAATTAATTAAAGAGATTGCGGTGTTAGAGTTAGAAGTTGTGTATTTGGAACAATATCTTCTCTCCTTGTATCGTAAAGCATTTGATGAACAATTACCCTCTGTAGCTCCATTTACCAAGGGGGAAAAAGTTAAGTCTCCTCCAACAAAACCTACAGCAATATTCGTTGAAGTATCTAAGCCTGAGCTCTTAACCAAAAGAGGAAGCTCTGCAGTACAATCATTTGGTCATGAGCTTGATGCTACGCAAAAGGAATATAGTGTAAATGAACCTCTGACTTCTGGGAAAGAATACAGTGTACATCAACCAGAAGGAAAACACTTAGACTCAGGTGTATATCGTTGTCACTCCTCATTATCCCAGTGTACAGCATTTACAACAAGAGTATCGCCTCCTGCAGCAGATGATTTAACTGAATCTCTACGTGCTTGTCATTCCCAACCACTGTCCATGATGGAGTATGCCCAAAATGTTGATGCTTCATCAAGAATAATCAGTTTGGCAGAACATCTTGGCACTCGAATATCTGATCATATTCCAAATACACCTAATAGGCTTTCTGAGGATATGGTCAAATGCATATCAGCTATATATTGCAAACTCGCAGATCCATCTACGACAAATCCTGGTCTTTCATCTCCCAGTTCATCCTTGTCTTCAACTAGTGGTTTTTCTATTGGAGATCAAGGAGACATGTGGAGTCCAGGGTTTAGGAATAATTCCTCTTTTGATGTGCGGTTAGACAATCCTTTCCATGTAGAAGGACTCAAGGAGTTTAGTGGGCCATACAGCACCATGGTTGAGGTATCGTGGATTTACCGAGAGAATCAGAAATTGGGTGATACTGAGCAATTGCTGAAGAATTTCAGATCACTTATTTGTCAATTAGAAGATGTAGATCCTGGGAAGTTAAAACACGAGGAGAGATTAGCTTTCTGGATCAACATACACAATGCTTTGGTGATGCATGCATTTTTGGCTTATGGAATTCCACAAAACAACGTGAAAAGAGTCCTCCTTCTGTTGAAGGCTGCATATAATGTTGGTGGTCATACAGTCAGTGCAGACACAATACAGAACGCTATACTCGGGTGCCAGATGCCTCGCCCCGGACAGTGGCTACGCTTGTTCTTTTCTCTAAGGACAAAATTCAAAGCTGGAGATGGACGACAAGCATATGGAATTGAGCATCCTGAGCCTCTTCTACACTTTGCACTCTGTTCAGGAAACCATTCTGATCCAGCGGTACGTGTGTATACACCCAAGAGAGTGGTTCAAGAACTAGAAGCTGCAAAGGAAGAATACATTCGAGCCACCTTTGGGGTACGGAAGGACAAGAAAATACTCTTACCTAAGCTCGTGGAGTCATTTTGTAAAGACTCGGGTTTATGCTCTGCTGGTACCTTGGAGATGATCCAAAAGTCTCTACCCGAATCTCTAAGAAAGAGTGTTAAAAAATATGACCTTGCAAAATCTAAGAAAAGCATAGAATGGATTCCACACAACTTCACTTTTCGATATCTCGTACCCAAGGAGCTGGTAAAATAA 1887 0.4155 MLQGMGHEGLIPSHKRSKSFPEKKRMEDDNADNHLETSDRTKLDTGYLTECGKPRKKRTPANDVQLTLKQEILLLEKRLQNQFEVRCTLEKALGYRPASLVTSNDMILPKPTSKLIKEIAVLELEVVYLEQYLLSLYRKAFDEQLPSVAPFTKGEKVKSPPTKPTAIFVEVSKPELLTKRGSSAVQSFGHELDATQKEYSVNEPLTSGKEYSVHQPEGKHLDSGVYRCHSSLSQCTAFTTRVSPPAADDLTESLRACHSQPLSMMEYAQNVDASSRIISLAEHLGTRISDHIPNTPNRLSEDMVKCISAIYCKLADPSTTNPGLSSPSSSLSSTSGFSIGDQGDMWSPGFRNNSSFDVRLDNPFHVEGLKEFSGPYSTMVEVSWIYRENQKLGDTEQLLKNFRSLICQLEDVDPGKLKHEERLAFWINIHNALVMHAFLAYGIPQNNVKRVLLLLKAAYNVGGHTVSADTIQNAILGCQMPRPGQWLRLFFSLRTKFKAGDGRQAYGIEHPEPLLHFALCSGNHSDPAVRVYTPKRVVQELEAAKEEYIRATFGVRKDKKILLPKLVESFCKDSGLCSAGTLEMIQKSLPESLRKSVKKYDLAKSKKSIEWIPHNFTFRYLVPKELVK* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2575 628 MobiDBLite consensus disorder prediction 1 40 - -
Pvu3g2575 628 MobiDBLite consensus disorder prediction 11 40 - -
Pvu3g2575 628 Pfam Leucine-zipper of ternary complex factor MIP1 62 143 IPR025757 -
Pvu3g2575 628 PANTHER TRANSPORTER, PUTATIVE-RELATED 10 628 - -
Pvu3g2575 628 PANTHER UNCHARACTERIZED 10 628 - -
Pvu3g2575 628 Pfam Protein of unknown function, DUF547 416 549 IPR006869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2575 Pvu-Chr3 47683875 47689290 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2575 - - gmx:100816025 1064.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2575 3 47683875 47689290 Pvu3g2575 3 47683875 47689290 ECH
Pvu2g0250 2 2562764 2567827 Pvu3g2575 3 47683875 47689290 PCT