Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2572 ATGTTACGGGCATGTTTGGGGTTGAATTACCATGGTAGAATGGAGGAGCTGCCAGGGGCGTTTGGAAGCAGCGCCAGTTTGGCTCTCCGATTGGGTCAAACAGTGTTTTCCACAGCTTCCCTTCTCTTCATGTGTTTGGATGTTGATTTCTACGGTTACACAGCTTTCTGCTATTTGGTAACAGTCATGGGTTTGGTAATTCCCTGGAGCATAACACTGTTGGTTGTGGATGCATACTCTGTCTTTATAAAATGTTTACCCCTCCAGCGAAGACTCGTAATGATAGTCTTTTTGGGAGACATGATTTTGTCATATCTGTCATTAGCTGCTGCATGTTCAACAGCCAGTGTCACAGATCTCCTGCTCGATGCCGATCGATCCTATTGCCCAGCAAAGCTATGCGGTAGATATCAACTATCTGCTGCTATGGCCTTCTTGTCTTGGTTTCTTTCATCAGCCTCTTGTCTGTTTAACTTCTGGCTTTTCCCTTCTTTGTAA 498 0.4498 MLRACLGLNYHGRMEELPGAFGSSASLALRLGQTVFSTASLLFMCLDVDFYGYTAFCYLVTVMGLVIPWSITLLVVDAYSVFIKCLPLQRRLVMIVFLGDMILSYLSLAAACSTASVTDLLLDADRSYCPAKLCGRYQLSAAMAFLSWFLSSASCLFNFWLFPSL* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2572 165 PANTHER CASP-LIKE PROTEIN 5B3 14 164 IPR045009 -
Pvu3g2572 165 Pfam Casparian strip membrane protein domain 22 150 IPR006702 -
Pvu3g2572 165 PANTHER CASP-LIKE PROTEIN 5C1 14 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2572 Pvu-Chr3 47647915 47650394 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2572 - - gmx:100791729 325.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2572 3 47647915 47650394 Pvu3g2572 3 47647915 47650394 ECH