Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2570 ATGGGTCGAATATTACAACAGTATGTGGATATCAAAAGGGACACTGTAGTTGCTAGTTTAATCGATTCCGATTTAAATGAGCTCAAGCTTGCAGCCGGAAAGTTCCTCCACGATGCAACCGTCGTAGGAGGCAAAGCCATTGGTGCTTCTTTCTTTAAATGGCTCTCTTCCTTTGCTGCCATTTATTTACTAATACTGGATAGCACAAACTGGAGGACGAATATACTAACAGCGTTGTTAGTGCCTTACATATTTTTTAGCTTTCCTGACTCGTTGTTCTACTTTTTAAGAGGTGAAGTTGGAGAATGGATTGCATTCGTTACAGTTGTGCTGAGGCTTTTCTTCCCTAGACATTTTCCTGATTGGCTGGAAATACCTGGCTCAATGATTCTTATTTTGACAGTGGCTCCCGAATTATTTGCTCACAAATTAAGGAATAACTGGGTTGGATTAGCAATTGATCTTTTCATTGGTTGTTACCTACTACAAGAACATATCAGGGCTTCTGGTGGATTCAAAAATTCTTTCACACAAAAACATGGAATATCAAATACTCTTGGAATCTTGCTCCTCATAGTCTATCCTATTTGTGCATTCATTATTCATTAA 609 0.3859 MGRILQQYVDIKRDTVVASLIDSDLNELKLAAGKFLHDATVVGGKAIGASFFKWLSSFAAIYLLILDSTNWRTNILTALLVPYIFFSFPDSLFYFLRGEVGEWIAFVTVVLRLFFPRHFPDWLEIPGSMILILTVAPELFAHKLRNNWVGLAIDLFIGCYLLQEHIRASGGFKNSFTQKHGISNTLGILLLIVYPICAFIIH* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2570 202 PANTHER COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 2-LIKE 6 202 - -
Pvu3g2570 202 PANTHER COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 2 6 202 IPR008892 GO:0016021
Pvu3g2570 202 Pfam Cold acclimation protein WCOR413 12 191 IPR008892 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2570 Pvu-Chr3 47609424 47610536 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2570 - - gmx:100817084 364.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2570 3 47609424 47610536 Pvu3g2570 3 47609424 47610536 ECH