Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2537 ATGGCGCAATGGTGGCGCTCCGCCGCCGGCCACCTCCAAACGGTGGCTGCGAGCCGTTGTTCCTCGTCTGTTTTCCGGCGCAACCATTACCATACGATTCAAGCCATCCCAAGGGAGTGCACTGGCAGCAAAGTCTCAGCGAGAGACCGAATGCAAGGTCGAATACCCGCCGTCCTTTTCTTCCAGAGTCTTCTAGAGAAAAACCCAGACGGTCGATCGGAATCGAAGAAGCACTTGCTTACCGTCGAGAAGAAGCAGATTAAGGCCATTCTCGACTCCGTCGACGCTCCTTCCTTCTGCTCCACGCGCTTCCCGCTCCAGATCCGTGCCGGATCCGGGTCCTCTCATTTGGTCGAATCCGGAACCGTGTTGCCTATCAAGATTCATAGGGACAAAGAGAGTGGGCAGATTCTGAATTTGGTGTTTGTTTGGGCTGAGGACGGAATGAAGTTGAAGGTGGATGTGCCTGTTATTTTCAAAGGGGAAGATGTTTGTCCTGGTATTCAGAAAGGAGGAATTTTGAACAAGATCAGACCTAGTCTAAAATATCTTGGCCCATCTGAGCACATTCCTTCAAACGTTGTTGTGGATGTGAGCAATCTAGACATTGAAGATAGAATATTCATGCGTGACATTGAGGTTCATCCATCCTTGAAGCTTATCAGTAAGAATGAAAACATGCCCATATGTAAAGTAGTTCCAACATGTTTGGGAAACAGAGAACCAATTGTGGAGTGA 738 0.4892 MAQWWRSAAGHLQTVAASRCSSSVFRRNHYHTIQAIPRECTGSKVSARDRMQGRIPAVLFFQSLLEKNPDGRSESKKHLLTVEKKQIKAILDSVDAPSFCSTRFPLQIRAGSGSSHLVESGTVLPIKIHRDKESGQILNLVFVWAEDGMKLKVDVPVIFKGEDVCPGIQKGGILNKIRPSLKYLGPSEHIPSNVVVDVSNLDIEDRIFMRDIEVHPSLKLISKNENMPICKVVPTCLGNREPIVE* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2537 245 PANTHER RIBOSOMAL PROTEIN L25/GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEIN 1 243 - -
Pvu3g2537 245 CDD Ribosomal_L25_TL5_CTC 32 142 IPR029751 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Pvu3g2537 245 Gene3D Ribosomal protein L25, beta domain 149 227 IPR037121 -
Pvu3g2537 245 PANTHER RIBOSOMAL PROTEIN L25/GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEIN 1 243 - -
Pvu3g2537 245 Pfam Ribosomal protein TL5, C-terminal domain 150 234 IPR020057 -
Pvu3g2537 245 SUPERFAMILY Ribosomal protein L25-like 30 234 IPR011035 GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2537 Pvu-Chr3 47221081 47224985 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2537 K02897 - gmx:100802599 428.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2537 3 47221081 47224985 Pvu3g2537 3 47221081 47224985 ECH