Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2520 ATGAATGCTTTGAGCTCCTTCTGCATGTTTCGATCTGACCCATTAGTCTTAAATGACATTCTGGTTACAAAGCCTCCAAAGAAATCACCTTTGCTCTTAAGGATGTCAGTGTTGATCTTTTCAATGGTGTGTGGTGTTTTTATCTGTTCAGTTTGTCTAAAGCAGGTAAGCACTCATGCTAGGACTATTCTTATGGAGTTGCAAAGTGAGAAGCCTTCACGGAATAGATTGGGCCTAACAGATGTTCCTTTGTTGCATTACCCCAATCCTGTGTCTTTCAACAGGAGTGAGTGTGCTGGGAATCCTGTGCGGTTCTTTGCTATTTTGTCAAATCAGAGATCAGGCAGTGGGTGGTTTGAGACCCTTTTGAATAGCCATATTAATACTTTGGATAAAGTTTACAACCTGGATTGGTTCAGTAGTGCTTCCAAGAATGAGTGCTCAGCTGCAATTGGATTGAAGTGGATGCTTAATCAGGGATTAATGGAGCACCCTAAGGAAGTAGCAGATTACTTCAACCGTAGAGGTGTTTCTGTCATATTTCTTTTTCGAAGAAACTTATTACGCAGAATGGTATCAATGCTTGCCAACTCCTATGACCAAAATGCTAAACTTTTGAATGGAGCTCATAAGTCTCATGTACATTCCATAGAAGAGGCGGATACACTTTCAAAGTACAAGCCTATCATTAATTCTACATCATTGCTGGCTAATTTGAAGGATATGGAGATGAGAACTGCAAAGGCTTTACAATACTTCAACACCAATAGGCATATGATCCTGTACTATGAAGATCTAATTAGAAATCGTACTAAGCTGAAAGACGTGCAAGATTTTTTAGGATTGCCACAGATGGAATTAGCAAGCCGTCAGGTTAAGATACACAAAGGACAATTGTCAGATCACATTAAAAATTGGGAAGATGTGAACAAAACACTACATGGAACTGCTTATGAGTGTTTCCTCCAAACTGATTATTCATCTTAA 987 0.3921 MNALSSFCMFRSDPLVLNDILVTKPPKKSPLLLRMSVLIFSMVCGVFICSVCLKQVSTHARTILMELQSEKPSRNRLGLTDVPLLHYPNPVSFNRSECAGNPVRFFAILSNQRSGSGWFETLLNSHINTLDKVYNLDWFSSASKNECSAAIGLKWMLNQGLMEHPKEVADYFNRRGVSVIFLFRRNLLRRMVSMLANSYDQNAKLLNGAHKSHVHSIEEADTLSKYKPIINSTSLLANLKDMEMRTAKALQYFNTNRHMILYYEDLIRNRTKLKDVQDFLGLPQMELASRQVKIHKGQLSDHIKNWEDVNKTLHGTAYECFLQTDYSS* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2520 328 Pfam Sulfotransferase domain 108 296 IPR000863 GO:0008146
Pvu3g2520 328 Gene3D - 103 311 IPR027417 -
Pvu3g2520 328 PANTHER PROTEIN, PUTATIVE, EXPRESSED-RELATED 127 326 - -
Pvu3g2520 328 PANTHER PROTEIN, PUTATIVE, EXPRESSED-RELATED 16 128 - -
Pvu3g2520 328 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 103 291 IPR027417 -
Pvu3g2520 328 PANTHER SULFOTRANSFERASE 127 326 - -
Pvu3g2520 328 PANTHER SULFOTRANSFERASE 16 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2520 Pvu-Chr3 47033038 47036574 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2520 - - pvu:PHAVU_003G245000g 662.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0203 2 2189561 2194498 Pvu3g2520 3 47033038 47036574 ECH
Pvu9g0654 9 11029237 11030820 Pvu3g2520 3 47033038 47036574 ECH
Pvu3g2520 3 47033038 47036574 Pvu3g2520 3 47033038 47036574 ECH
Pvu3g2520 3 47033038 47036574 Pvu2g0203 2 2189561 2194498 PCT