Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2366 ATGGCCACGATGCTTCAGAGTGAAAAAGACCCTCCACAACCACCTTCACGTGGCTTTCTCGACACAGTTGAAGAAATCACCACAATATATAGGTCACTGCCACCTCGACCTTCCATTGAAGAGGTGGAAGCTGCCACGTCCACTGTGGATACCCTCAACAACGAGGAACAAACCAAACTCCACGAAATCTCTACCCAACAACCTCCTCACGATGTCCCTGAAGACCTCTTCTCTGTCCTGCAGCAACTGAAGAAGACCATGGTACTTTTCCACACCCACCAACACAGGAGAGAGGCTCTTCAACTTCTTGAGCTCGAAAAGATGTTTCAAACCTTCGGTGATCTCATTCAGAGGGCTTCTGAATTGGTCTCTGGAGATACCCAGAAGCAAAAGCTTCCCACTTTACCTGAAGAACTCGTTGTGATCACTGACCCAAGTGAAACAGTGGTGAAGGAAGAGGAAGAATCACAGAAGAATCATTTCCAAGTGATACAGCCTTCCTTGTCTAAAGGGAATGGAAGTATTGAGAAATTCAGTCTAATGAAAGTTGCTACTATTATTGAAAGTTATGCTGGTAGTGGAGCTACAACCCTTGAACTTAGAGGGAAGTTGGTGGATCAGATGGAATGGTTGCCAGTGTCAATTGGGAAATTATCTGATGTCACTGAAATGGACCTATCTGAAAACAAAATCATGGCTCTTCCTACAACCATTGTGGGTCTCAAGGCCTTAACAAAGCTTGATCTTCACTCAAACCAACTTATAAACCTTCCCCATTCATTTGGTGAATTGATAAACCTTGTTGATCTTGACCTCCACGCCAACAGATTGAAATCACTTCCTGTCACTTTCGGAAACTTGACAAACCTCATTGATCTAGACTTGAGCTCAAATGGGTTCACAAATTTACCAGAGACAATTGGGAATTTGAACAGCTTGAAGAGATTGAATGTTGAGACCAACGAGCTTGAGGAACTGCCTCACACAATTGGAAATTGCTCATTTCTATCTGCGCTCAGGTTAGATTTCAATCAGCTCAAGGGCCTACCTGAGGCAATTGGGAAGCTTGAATGGTTGGAGATTCTCACTTTCAAGTATAATAGAGTTAAGAGGCTGCCTTCCACAGTGGGTAATCTCTGGAATTTGAAGGAACTTGATATTAGCTTTAATGAACTCGAATTTGTACCAGAGAATCTGTGTTTTGCAACTAATTTGAAGAAATTAAACTTGGGAAAGAACTTTGCGGACCTAAGAGCCTTGCCAACATCAATTGGAAATCTTGAAATGCTTGAGGAGTTAGATATAAGTGATAATCAAATAAAATCTTTACCAGAGTCTTTCAGGTTCTTGTCCAAGTTAAGAGTTTTTCGAGCTGATGATACCCCCCTTGAGGTGCCACCCAGAGAATTGGTCAAGTTGGATGCTCAGGAAGTTGTGCACTATATGGCTGATTTTGTCACCAAAAGGGACACAAAACTTGTGCCATCAAAGAAGAAAAAGAAGGGCTTTTGGTTCTGGTTTCGCTCCCTATTTTGTTCTAAACTTGAATGA 1551 0.4236 MATMLQSEKDPPQPPSRGFLDTVEEITTIYRSLPPRPSIEEVEAATSTVDTLNNEEQTKLHEISTQQPPHDVPEDLFSVLQQLKKTMVLFHTHQHRREALQLLELEKMFQTFGDLIQRASELVSGDTQKQKLPTLPEELVVITDPSETVVKEEEESQKNHFQVIQPSLSKGNGSIEKFSLMKVATIIESYAGSGATTLELRGKLVDQMEWLPVSIGKLSDVTEMDLSENKIMALPTTIVGLKALTKLDLHSNQLINLPHSFGELINLVDLDLHANRLKSLPVTFGNLTNLIDLDLSSNGFTNLPETIGNLNSLKRLNVETNELEELPHTIGNCSFLSALRLDFNQLKGLPEAIGKLEWLEILTFKYNRVKRLPSTVGNLWNLKELDISFNELEFVPENLCFATNLKKLNLGKNFADLRALPTSIGNLEMLEELDISDNQIKSLPESFRFLSKLRVFRADDTPLEVPPRELVKLDAQEVVHYMADFVTKRDTKLVPSKKKKKGFWFWFRSLFCSKLE* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2366 516 Gene3D Ribonuclease Inhibitor 175 483 IPR032675 -
Pvu3g2366 516 SMART LRR_typ_2 264 286 IPR003591 -
Pvu3g2366 516 SMART LRR_typ_2 241 263 IPR003591 -
Pvu3g2366 516 SMART LRR_typ_2 287 309 IPR003591 -
Pvu3g2366 516 SMART LRR_typ_2 310 333 IPR003591 -
Pvu3g2366 516 SMART LRR_typ_2 334 356 IPR003591 -
Pvu3g2366 516 SMART LRR_typ_2 218 240 IPR003591 -
Pvu3g2366 516 SMART LRR_typ_2 427 449 IPR003591 -
Pvu3g2366 516 SMART LRR_typ_2 379 402 IPR003591 -
Pvu3g2366 516 MobiDBLite consensus disorder prediction 1 20 - -
Pvu3g2366 516 SMART LRR_bac_2 379 398 - -
Pvu3g2366 516 SMART LRR_bac_2 427 446 - -
Pvu3g2366 516 SMART LRR_bac_2 287 306 - -
Pvu3g2366 516 SMART LRR_bac_2 310 329 - -
Pvu3g2366 516 SMART LRR_bac_2 333 352 - -
Pvu3g2366 516 SMART LRR_bac_2 241 260 - -
Pvu3g2366 516 PANTHER LEUCINE-RICH REPEAT-CONTAINING 21 512 - -
Pvu3g2366 516 PANTHER PLANT INTRACELLULAR RAS-GROUP-RELATED LRR PROTEIN 5 21 512 - -
Pvu3g2366 516 ProSiteProfiles Leucine-rich repeat profile. 429 450 IPR001611 GO:0005515
Pvu3g2366 516 Pfam Leucine rich repeat 266 323 IPR001611 GO:0005515
Pvu3g2366 516 Pfam Leucine rich repeat 216 254 IPR001611 GO:0005515
Pvu3g2366 516 SUPERFAMILY L domain-like 189 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2366 Pvu-Chr3 45028124 45030704 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2366 290 480 Receptor kinase-like Gene Family AT3G11080 33.990 1.35e-14 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2366 - - gmx:100798442 861.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2366 3 45028124 45030704 Pvu3g2366 3 45028124 45030704 ECH