Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2351 ATGGCAGAGTTTGCAGGATATTTTCGTTACTGCTTGAACACTGGGAAACTTCTCCTTTTAGCAGTTTTGGTCTCTGGAGGAGTTGTCTTGCATGTTTTGGCATGTGCGTTATATAAAAATTGGTGGCCAATGCTGACTACGATAACATATGTGTTTCTTCCAATACCTCTGCTCTTCTCTGCGGGATCTGAGCATTCTTCTTTATTTTCTGAATCTGATAACAACTGGGTGAATGCAAGCAAGTTCTTAAGTGGGGCATCAACTGTTGGAAGCATTGCCATTCCAGCCATATTAAAGCATTGTGGTGTTATCAGTTGGGGAGCCCTTGCAATGGAACTCTCTTCATTCTTTGTGTTTGTATCTGCCATAATGTGTTACATGAGGATGAACGATGAAGATCATTATAGTATTCTTTGA 417 0.4053 MAEFAGYFRYCLNTGKLLLLAVLVSGGVVLHVLACALYKNWWPMLTTITYVFLPIPLLFSAGSEHSSLFSESDNNWVNASKFLSGASTVGSIAIPAILKHCGVISWGALAMELSSFFVFVSAIMCYMRMNDEDHYSIL* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2351 138 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 55 HOMOLOG 1 135 - -
Pvu3g2351 138 Pfam Vacuolar protein sorting 55 18 133 IPR007262 -
Pvu3g2351 138 PANTHER LEPTIN RECEPTOR-RELATED 1 135 IPR007262 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2351 Pvu-Chr3 44830967 44831850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2351 1 136 EF-hand Containing Proteins AT1G32410 60.145 1.11e-59 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2351 - - gmx:100775400 205.682
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0046 2 563846 565959 Pvu3g2351 3 44830967 44831850 PCT