Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2339 ATGTGCTCCTCCAGGTCTACCACCCCATCGAGACCTTCTTACTTGGAACAAGACCACGGTTTGGCTTCCTTAACCGACATGGATGCCTGCCATCGAGCCAACAATTTCGTATCTAGGTCCATGACCATCGGTTACGCCACCTCATACTCCACAACCGGATTAAGGAACACCCTTCCCGTTTTCTCACCGAGATCTAAGAGATTCCACGACACCAGATTCGAAGACCACCACTCTCACTTCCTCGCCGCTTGTTTCCTCTGTAAAAAGTCACTCGGGGACAACAGAGACATCTTCATGTATAGAGGGGACACGCCGTTTTGTAGCCAGGAGTGCAGGCAAGAACAAATAGAGATAGACGAAGCCAAAGAGAAGAACATGAACCTTTCTTCATCGATGAAAGCTTTGAGGAATAAGGAACAAAGAAAATCCACGTCGCCAAACAAGGCGCAAGGCTACTCGTTCCGTACGGGGGCAGTTGCGGCGGCTTAG 489 0.499 MCSSRSTTPSRPSYLEQDHGLASLTDMDACHRANNFVSRSMTIGYATSYSTTGLRNTLPVFSPRSKRFHDTRFEDHHSHFLAACFLCKKSLGDNRDIFMYRGDTPFCSQECRQEQIEIDEAKEKNMNLSSSMKALRNKEQRKSTSPNKAQGYSFRTGAVAAA* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2339 162 Pfam zinc-finger of the FCS-type, C2-C2 71 122 IPR007650 -
Pvu3g2339 162 Coils Coil 111 138 - -
Pvu3g2339 162 PANTHER - 54 162 - -
Pvu3g2339 162 MobiDBLite consensus disorder prediction 123 162 - -
Pvu3g2339 162 PANTHER FCS-LIKE ZINC FINGER 1-RELATED 54 162 IPR044533 -
Pvu3g2339 162 ProSiteProfiles Zinc finger FLZ-type profile. 79 123 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2339 Pvu-Chr3 44745915 44747079 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2339 - - aprc:113849917 261.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2339 3 44745915 44747079 Pvu2g0031 2 401088 402559 PCT