Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2258 ATGGCTTCCAAGGGTGCTCTTCTCTTGTGTCTCAACATCCTGTTTTTCACTGTGGTTAGCTCCACATATGTGCCATGCAATCCACCCCCAAAAACTCCCAAACACCCACCTGTCCCAAAGCCACCTTCCACAAAGTCTGGCAGTTGCCCTGAGAACACCCTTAAGTTTGGTGTGTGTGCTGATGTGTTAGGTTTGATCGGCGTTGAGCTTGGGAAGCCACCAAAGACCCCATGCTGCAACCTCATCCAGGGTCTGGCTGATCTTGAAGCCGCCGTCTGCCTTTGCACTGCTCTCAGAGCTAATGTGTTAGGCATCAACCTCAATGTCCCCATCAAGTTGAACTTGCTCCTCAACTACTGTGGAAAGAAAACTCCTAAGGATTTCGTCTGCTATTAA 396 0.4949 MASKGALLLCLNILFFTVVSSTYVPCNPPPKTPKHPPVPKPPSTKSGSCPENTLKFGVCADVLGLIGVELGKPPKTPCCNLIQGLADLEAAVCLCTALRANVLGINLNVPIKLNLLLNYCGKKTPKDFVCY* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2258 131 SMART aai_6 49 130 IPR016140 -
Pvu3g2258 131 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 2 130 - -
Pvu3g2258 131 CDD HPS_like 47 130 IPR027923 -
Pvu3g2258 131 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 52 130 IPR036312 -
Pvu3g2258 131 Gene3D - 48 131 IPR036312 -
Pvu3g2258 131 PANTHER - 2 130 - -
Pvu3g2258 131 Pfam Hydrophobic seed protein 49 130 IPR027923 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2258 Pvu-Chr3 43634374 43635634 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2258 42 130 Acyl Lipid Metabolism Gene Families AT4G22490 35.955 5.81e-13 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2258 - - gmx:100500229 209.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2258 3 43634374 43635634 Pvu3g2258 3 43634374 43635634 ECH