Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2256 ATGTCTCTAAAATTAAAAGCTAAAGCTATGTTCTTCATCTTGAAAATAACAATGTTAAATGTTTTGCCACCAATATATGCATGTGGTCCCTGCACCTCCCCACCTCAACCCAAGCAGCCACCGCATCACGGCGGAGGCCGCCCAAAAGTGTCCCCTCCTCTGCCGCCGATCATAATCAACCCTCCAGTGGTGCCTCCGCCGGTGGTGATTTACCCTCCACCAAGCTCACCGCCGTACTCGCCGCCGCACCGGACTTGCCCAATTGATGCCCTAAAATTGGGACTTTGCTTGGACGTGCTTGGAGGATTGGTCCACGTGGGAATAGGGAAGCCAGTCGAGAATGTGTGCTGTCCCTTTATACAAGGGTTGCTTGACCTTGAAGCTGCAATTTGTCTTTGCACCGTTATTAGGGCTAAGGTTCTGAAGCTCAATATCTTCCTACCTATTGCACTTCAAGTTTTGATCACCTGTGGGAAGACTCCTCCTCCTGGTTTTGTTTGTCCACCTCTGTACTGA 516 0.5 MSLKLKAKAMFFILKITMLNVLPPIYACGPCTSPPQPKQPPHHGGGRPKVSPPLPPIIINPPVVPPPVVIYPPPSSPPYSPPHRTCPIDALKLGLCLDVLGGLVHVGIGKPVENVCCPFIQGLLDLEAAICLCTVIRAKVLKLNIFLPIALQVLITCGKTPPPGFVCPPLY* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2256 171 SMART aai_6 86 167 IPR016140 -
Pvu3g2256 171 Pfam Hydrophobic seed protein 85 168 IPR027923 -
Pvu3g2256 171 CDD HPS_like 83 167 IPR027923 -
Pvu3g2256 171 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN 6 169 - -
Pvu3g2256 171 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 88 169 IPR036312 -
Pvu3g2256 171 Gene3D - 84 169 IPR036312 -
Pvu3g2256 171 PANTHER - 6 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2256 Pvu-Chr3 43624901 43625416 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2256 75 169 Acyl Lipid Metabolism Gene Families AT4G22490 34.737 5.16e-11 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2256 - - gmx:100802510 226.868
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2256 3 43624901 43625416 Pvu3g2256 3 43624901 43625416 ECH