Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2255 ATGGGTTTCAAAGCTTCTTCCTCCCTTGCTCTTCTCCTCACACTCAACCTCCTTTTCTTCTCACTTGTCTCTGCATGCGGTAGTTACTCATGCCCTGGTCCAAACCCAAAACCAAACCCAACACCCAGCCCCAATCCTAGTGGCTCGTGCCCCCGTGACGCACTCAAACTAGGTGTATGCGCCAATGTGCTAAACGGGTTGGTGAACGCCACTTTGGGTCAACCACCAGTTACCCCTTGCTGCACCCTTCTTGATGGCCTCGTTGATCTTGAGGCTGCAGTATGCCTCTGCACTGCCCTTAAAGCAAACATTTTGGGCATCAACCTCAACCTTCCCATCTCACTCTCCTTGCTTCTCAATGTTTGTTCAAGACAAGCCCCACGTGATTTCCAATGTGCTTGA 402 0.51 MGFKASSSLALLLTLNLLFFSLVSACGSYSCPGPNPKPNPTPSPNPSGSCPRDALKLGVCANVLNGLVNATLGQPPVTPCCTLLDGLVDLEAAVCLCTALKANILGINLNLPISLSLLLNVCSRQAPRDFQCA* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2255 133 SMART aai_6 50 132 IPR016140 -
Pvu3g2255 133 Gene3D - 49 133 IPR036312 -
Pvu3g2255 133 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Pvu3g2255 133 PANTHER - 7 133 - -
Pvu3g2255 133 Pfam Hydrophobic seed protein 50 133 IPR027923 -
Pvu3g2255 133 PANTHER 14 KDA PROLINE-RICH PROTEIN DC2.15 7 133 - -
Pvu3g2255 133 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 52 132 IPR036312 -
Pvu3g2255 133 CDD HPS_like 48 132 IPR027923 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2255 Pvu-Chr3 43618809 43619581 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2255 39 132 Acyl Lipid Metabolism Gene Families AT4G22490 41.489 6.70e-16 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2255 - - gmx:100801985 185.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2255 3 43618809 43619581 Pvu3g2255 3 43618809 43619581 ECH