Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2254 ATGGGTTCCAAAACTCGCTCTTCCCTTGCTCTTTTCCTCACACTTAACATCCTCTTCTTTGCCCTTGTCTCTGCTTGTGGGACATGCCCTGACACTAAGCCTAGGCCAAAGCATAAGCCTGTGAAACCAAATCCTTCAGGTGGTTCCGGTGGTTCCGGTGGTTCCGGTGGTTCAGGAGGCTCTGGAGGTTCAGGAGGCTCTGGTGGTTCAGGAGGGTCTGGTGGTTCAGGAGGGTCTGGTGGTTCAGGAGGCTCTAATGGTTCAGGAGGGTCTGGTGGTTCAGGAGGCTCGGGTGGTTCAGGAGGCTCTAATGGTTCAGGAGGGTCTGGTGGTTCAGGAGGCTCGGGTGGTTCTGGTGCCTTATGCCCCCGTGACGCACTCAAACTAGGAGTGTGTGCCAATGTGCTAAACGGGTTGGTGAACGTGACATTGGGTCAACCCCCAGTTAGCCCTTGCTGCACCCTCCTCAATGGTCTGGTTGACCTTGAAGCTGCAGTGTGCCTCTGCACTGCCCTAAGAGCAAACATTTTAGGCATCAACCTCAACCTTCCCATCTCACTCTCCTTGCTTCTCAACGTTTGCTCGAGGCAGGTCCCACGTGATTTCCAATGTGCCTAA 618 0.5453 MGSKTRSSLALFLTLNILFFALVSACGTCPDTKPRPKHKPVKPNPSGGSGGSGGSGGSGGSGGSGGSGGSGGSGGSGGSGGSGGSNGSGGSGGSGGSGGSGGSNGSGGSGGSGGSGGSGALCPRDALKLGVCANVLNGLVNVTLGQPPVSPCCTLLNGLVDLEAAVCLCTALRANILGINLNLPISLSLLLNVCSRQVPRDFQCA* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2254 205 SMART aai_6 122 204 IPR016140 -
Pvu3g2254 205 PANTHER - 118 205 - -
Pvu3g2254 205 PANTHER - 8 45 - -
Pvu3g2254 205 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 124 204 IPR036312 -
Pvu3g2254 205 Pfam Hydrophobic seed protein 122 205 IPR027923 -
Pvu3g2254 205 MobiDBLite consensus disorder prediction 48 113 - -
Pvu3g2254 205 Gene3D - 121 205 IPR036312 -
Pvu3g2254 205 MobiDBLite consensus disorder prediction 29 115 - -
Pvu3g2254 205 CDD HPS_like 122 204 IPR027923 -
Pvu3g2254 205 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Pvu3g2254 205 PANTHER 14 KDA PROLINE-RICH PROTEIN DC2.15 8 45 - -
Pvu3g2254 205 PANTHER 14 KDA PROLINE-RICH PROTEIN DC2.15 118 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2254 Pvu-Chr3 43610147 43611143 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2254 122 204 Acyl Lipid Metabolism Gene Families AT4G22490 44.706 3.26e-14 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2254 - - pvu:PHAVU_003G218800g 238.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2254 3 43610147 43611143 Pvu3g2254 3 43610147 43611143 ECH