Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2253 ATGGGTTCCAAAACTCACTCTTCCCTTGCTCTTTTCCTCACACTCAACATCCTCTTCTTTGCCCTTGTCTCCTCTTGTGGGACATGCCCTGGCAATAAGCCTAGGCCAAAGCATAAGCCTGTGAAACCAAGTCCTTCAGGTGGTTCCGGTGGCCCGGGAGGTTCCGGTGGCTCGGGTGGTTCGGGTGGCTCTGGTGGTTCTGGTGGATCTGGTGGTTCAGGTGGCTCTGGTGGTTCAGGCGGCTCTGGTGGTTCTGGTGCCTCTTGCCCCCGTGATGCACTCAAACTAGGAGTGTGTGCCAATGTGCTAAACGGGTTGGTGAACGTCACCTTGGGTCAACCACCAGTTACCCCTTGCTGCAGTCTCCTCAGTGGTCTCGTTGATCTTGAGGCTGCAGTGTGTCTCTGCACTGCCCTTAGAGCAAACATTTTGGGCATCAACCTCAACCTTCCCATCTCTCTCTCCTTGCTTCTCAACGTTTGCTCTATACAAGCCCCACGTGATTTCCAATGTTCTTAA 519 0.5376 MGSKTHSSLALFLTLNILFFALVSSCGTCPGNKPRPKHKPVKPSPSGGSGGPGGSGGSGGSGGSGGSGGSGGSGGSGGSGGSGGSGASCPRDALKLGVCANVLNGLVNVTLGQPPVTPCCSLLSGLVDLEAAVCLCTALRANILGINLNLPISLSLLLNVCSIQAPRDFQCS* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2253 172 Gene3D - 87 172 IPR036312 -
Pvu3g2253 172 SMART aai_6 89 171 IPR016140 -
Pvu3g2253 172 PANTHER 14 KDA PROLINE-RICH PROTEIN DC2.15 7 46 - -
Pvu3g2253 172 PANTHER 14 KDA PROLINE-RICH PROTEIN DC2.15 84 172 - -
Pvu3g2253 172 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Pvu3g2253 172 CDD HPS_like 87 171 IPR027923 -
Pvu3g2253 172 MobiDBLite consensus disorder prediction 31 83 - -
Pvu3g2253 172 Pfam Hydrophobic seed protein 89 172 IPR027923 -
Pvu3g2253 172 MobiDBLite consensus disorder prediction 60 83 - -
Pvu3g2253 172 PANTHER - 84 172 - -
Pvu3g2253 172 PANTHER - 7 46 - -
Pvu3g2253 172 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 91 171 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2253 Pvu-Chr3 43593726 43594816 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2253 88 171 Acyl Lipid Metabolism Gene Families AT4G22490 40.476 1.48e-12 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2253 - - gmx:100798361 217.238
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2253 3 43593726 43594816 Pvu3g2253 3 43593726 43594816 ECH