Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2250 ATGCGTGTGAAGGAAATGCACCCCTTGTGCTGCATCTCACTGGAAAGTCCGGGGATCGGGAGCGACTCTCCGGAGCCCGAGGCTGCTGCGTTGTCCAGGACGAGGAGTCTCCCGGCCGGTGGATCTGACGGCATTGCACGGCGGGGATCCGAGGCCACGGTGGCCGGAGTTCTCTACAAGTGGACCAATTACGGCAAGGGATGGAGATCCCGCTGGTTCCTCCTCCGCAATGGCGTACTCTCCTATGCCAAGATCTGCTGGCCGGAAAACCTCAACCTCCTCTCTCCGGTTGACGATGTGCGCCTCATCGGAGAAGTCACCGCCAACCGCCTTGCCAGAGATGCTGCTACCGTGCGCCGGAAGAGTCACAAACCTCCTTCCTCCTCTTCCTCTGCCGTCGTGCATCTCAAGATCTCGTCATTCAGAGAGAGCAAGTCTGACGATAGACGGTTCTATATATTCACAGCCACAAAGACTCTCCATCTGAGAACTGATTCAAGAAAGGACCGCGTGGCGTGGATTCAAGCTTTGGTTTCAACCCGAGAATTATATCCTCTTCGAGCGCTCAGCGACCATCTCTCCCTCGCACCGAATCATATATCTGTATCAACCGAGAGGCTTAGGAAACGCTTAGTTGAAGAGGGTAACAGTGAGAGCCTTGTCAAGGAGTGCGAGCAAATCATGTTTGCCGAGTTCTCTGAATTACAAGAGCAACTTCAGATCCTATGTCAAGAACGAAGGAATTTGCTTGATACAATAAGGCAGCTGGAGGCTGCTAATATTGAACCTGAGGCCTCTGCCTTGCATGACAGTGAATACCAATTAACGAAGAATGGCTTTTCAAATTTAGGACATGGAAAATATAGCGAATGCAGTACTACTGAATCATCGGATGATATTGAGAAACAGGAGATGGAGGAAGTGTCAGATGAAGATGAAATCTCATACTATGACACTAAAGAGTATTTTACAGAACTTGGTTTTAGGTGTGGGTCCACAGGAGATTTGGATCCAACGAACATGTCTGGGGAAGCTAACACACAATGCATTGATTTGGAGAACAGTCTTTTTGCGAAGACGGTCAATGATTTTGGGTACCCTCAGATAGCAAGGCGAAAGAAGCTTCCAGATCCTGTTGAGAAGGAAAAGGGCGTTAGTCTTTGGTCAATTATCAAAGACAACGTGGGCAAAGATCTCACACGAGTGTGTCTTCCTGTATACTTTAATGAGCCAATTTCATCTCTTCAGAAATGTTTTGAAGACTTGGAGTACTCTTTTCTTCTTGATAGAGCTTATGAGTACGGAAAAGCGGGAAACGGTCTCCTTCGGGCTCTGAATGTTGCTGCCTTTGCTGTTTCTGGATATGCATCATCCGAAGGTCGTCATTGTAAACCCTTTAATCCATTGTTAGGGGAAACTTATGAAGCGGATTATCCTGACAAAGGAGTTCGTTTCTTTTCCGAGAAGGTGAGTCACCATCCAACTGTCGTTGCCTGCCACTGTCAAGGTAGAGGATGGAAGTTTTGGGCTGACAGTAACATTCGGTCAAAGTTTTGGGGAAGGTCAATTCAGCTTGACCCAGTGGGTGTTCTGACCCTGGAGTTTGATGACGGTGAAATATTTCAGTGGAGCAAGGTCACGACAACAATTTATAATCTTATCCTTGGGAAAATATATTGCGATCATCATGGAAACATGGACATCCGTGGTAATCGCCAATATTCGTGCAGACTCAAGTTTAAAGAACAGGCGATTCTTGATCGAAATCCTCACCAGGTGCATGGCTTTGTTGAAGATGTAACGGGAAAAAAGGTTGCCACATTATTTGGCAAGTGGGATGACAGCATGTATTATGTTAATGGTGAAGCGAATGTGAAGCCAAAAGATTGCACTTTGCCTGGCACAAACTTCTTGTGGAAAAGGACTAAGCCACCTTCTAATCTCACCCGGTACAATTTGACATCGTTTGCAATCACACTGAATGAGCTTACTCCAGGGCTAAAGGAGAAGCTTCCACCCACGGATTCCAGGCTGAGACCAGATCAGCGGCATCTAGAGGATGGGGAATACGAGAAGGCTAATATTGAAAAACAAAGGTTGGAAAAGAGGCAGAGAATGTCAAGGAAACTGCAAGAAAATGGATGGCAGCCTAGGTGGTTCCACAAAGAAGGTGAAAACGGGACGTTTCGATATATTGGCGGGTATTGGGAAGCGAGAGCTCTAGGAAAATGGAATGGGTGCCCAAATATCTTCGGTGAAGTTTATGATGGAAATTTGATCCTATAG 2286 0.4681 MRVKEMHPLCCISLESPGIGSDSPEPEAAALSRTRSLPAGGSDGIARRGSEATVAGVLYKWTNYGKGWRSRWFLLRNGVLSYAKICWPENLNLLSPVDDVRLIGEVTANRLARDAATVRRKSHKPPSSSSSAVVHLKISSFRESKSDDRRFYIFTATKTLHLRTDSRKDRVAWIQALVSTRELYPLRALSDHLSLAPNHISVSTERLRKRLVEEGNSESLVKECEQIMFAEFSELQEQLQILCQERRNLLDTIRQLEAANIEPEASALHDSEYQLTKNGFSNLGHGKYSECSTTESSDDIEKQEMEEVSDEDEISYYDTKEYFTELGFRCGSTGDLDPTNMSGEANTQCIDLENSLFAKTVNDFGYPQIARRKKLPDPVEKEKGVSLWSIIKDNVGKDLTRVCLPVYFNEPISSLQKCFEDLEYSFLLDRAYEYGKAGNGLLRALNVAAFAVSGYASSEGRHCKPFNPLLGETYEADYPDKGVRFFSEKVSHHPTVVACHCQGRGWKFWADSNIRSKFWGRSIQLDPVGVLTLEFDDGEIFQWSKVTTTIYNLILGKIYCDHHGNMDIRGNRQYSCRLKFKEQAILDRNPHQVHGFVEDVTGKKVATLFGKWDDSMYYVNGEANVKPKDCTLPGTNFLWKRTKPPSNLTRYNLTSFAITLNELTPGLKEKLPPTDSRLRPDQRHLEDGEYEKANIEKQRLEKRQRMSRKLQENGWQPRWFHKEGENGTFRYIGGYWEARALGKWNGCPNIFGEVYDGNLIL* 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2250 761 SUPERFAMILY Oxysterol-binding protein-like 381 755 IPR037239 -
Pvu3g2250 761 SMART PH_update 52 184 IPR001849 -
Pvu3g2250 761 MobiDBLite consensus disorder prediction 15 45 - -
Pvu3g2250 761 SUPERFAMILY PH domain-like 51 179 - -
Pvu3g2250 761 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 2A 4 755 - -
Pvu3g2250 761 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 4 755 IPR000648 GO:0008289
Pvu3g2250 761 Pfam Oxysterol-binding protein 386 739 IPR000648 GO:0008289
Pvu3g2250 761 Gene3D - 682 738 - -
Pvu3g2250 761 Gene3D - 472 632 - -
Pvu3g2250 761 ProSiteProfiles PH domain profile. 51 182 IPR001849 -
Pvu3g2250 761 Pfam Pleckstrin homology domain 56 177 - -
Pvu3g2250 761 Gene3D - 48 183 IPR011993 -
Pvu3g2250 761 Coils Coil 232 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2250 Pvu-Chr3 43548650 43558232 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2250 K20456 - gmx:100812205 1418.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2250 3 43548650 43558232 Pvu3g2250 3 43548650 43558232 ECH
Pvu2g0639 2 6820109 6830898 Pvu3g2250 3 43548650 43558232 PCT