Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2196 ATGGCTGTTTCCTGCTGGACCCTTTTTTTTGCTGCTCTTTCTGGGATTCTTTTCTCAACTCAACTCTCTGCTTCCCAAAAAGTTCCGAACTACACATTTATGCGCAATGCAACGACGGCACCAGACATCTCAAATTATGACTACATCATAATTGGCGGCGGCACCGCAGGTTGTCCTCTAGCTGCGACGCTGTCCCAGAATTACAGCGTGTTGCTCCTTGAACGCGGTGGCTCACCCTACGGCAACCCCAACATCAGCAACTTAGCAGCCTTCGGTGCTGCCCTCTCTGACACCTCCCCTACCTCTCCCGCTCAGCGTTTCATCTCCGAAGACGGCGTCATCAACTCAAGAGCCCGCGTCCTCGGCGGTGGAAGTTGCTTGAACGCTGGGTTTTACACTCGCGCCAGCCCTGAATATGCAAGGGAAGCGGGGTGGGATGGAAGGGCAGTGAATGAGTCGTACGAATGGGTGGAGAAGATAGTGGCGTTTGAGCCAGAAGTGAAGCAGTGGCAGTCGGCTGTTCGGGAAGGACTGCTTGAGATAGGTGTTGTGCCTAATAATGGCTTCACTTATGATCACATTGGTGGCACTAAGGTAGGAGGCACCATCTTTGACGACCAAGGCTTCAGACACACCGCTGCAGATCTTTTGCAATATGCCAACCCCTCTGCAATTACCCTCCTTCTGCATGCCACCGTCCACAGGATCCTTTTTAGAGTCAAAGATGGATCAAAACCAATGGCTCATGGAGTGGTGTTCAGAGATTCATTGGGTCGTAAACACAGGGCGTACCTGAAGCACCATCCCAGGAGCGAGATCATTGTTTCGGCTGGTGCCCTTGGAAGCCCACAACTTCTAATGTTGAGTGGCGTTGGGCCGGCAGAGCAGCTTCGGGCCCATAACATCAGAATAACGTTGGACCAGCCATTGGTTGGCCAGGGAATGTCAGACAACCCCATGAATGCCATCTTTATCCCTTCTCCTGAACCGGTGGAGGTATCTCTGATTCAGGTGGTGGGTATCACCAGTTTTGGCAGTTACATTGAAGCTGCCAGTGGTGAAAACTTCGCCGGTGGTTCTCCTAGGGACTACGGAATGTTCTCTCCCAAGATTGGTCAACTGTCGAGGGTGCCTCCAAAACAAAGGACCCCAGAAGCCCTTGCTAAGGCAACAGAAGCGATGCAGAGTCTGGACCAAGCAGCCTTCAGGGGAGGGTTCATCCTGGAGAAGATAATGGGTCCGATTTCAACCGGGCATTTGGAGCTCCGAAGCCGCGATCCAAACCAGAACCCGTCAGTGACCTTCAACTACTTCCAGGAGCCCCAAGACTTGGAGAGGTGCGTGCAGGGCCTTAGCGTGGTGGAGAAGATAATCGAATCCAAGGCATTCGCTCCCTTCAGATACCCCAACATGCCAGTCTCAGTGCTTCTCAACATGACCGCAAATTCCCCCGTTAACTTGCTGCCCAAACACACCAATTCCTCCCTCTCTCTCCAACAGTTCTGCAGAGACACTGTGATGACCATTTGGCACTACCATGGAGGTTGCCAAGTTGGGAGAGTGGTGGACAGGGACTACAAGGTTCTTGGTGTGGATGCCCTTCGCGTTATCGATGGTTCCACCTTTAACTACTCTCCTGGGACTAATCCTCAGGCCACCGTTATGATGCTTGGCAGGTACATGGGACTTCAAATACTGAGTCAGAGACTTGGTGCGCCTGCTGCGGATCAAACATATCAAAAGACTGTATAG 1752 0.5228 MAVSCWTLFFAALSGILFSTQLSASQKVPNYTFMRNATTAPDISNYDYIIIGGGTAGCPLAATLSQNYSVLLLERGGSPYGNPNISNLAAFGAALSDTSPTSPAQRFISEDGVINSRARVLGGGSCLNAGFYTRASPEYAREAGWDGRAVNESYEWVEKIVAFEPEVKQWQSAVREGLLEIGVVPNNGFTYDHIGGTKVGGTIFDDQGFRHTAADLLQYANPSAITLLLHATVHRILFRVKDGSKPMAHGVVFRDSLGRKHRAYLKHHPRSEIIVSAGALGSPQLLMLSGVGPAEQLRAHNIRITLDQPLVGQGMSDNPMNAIFIPSPEPVEVSLIQVVGITSFGSYIEAASGENFAGGSPRDYGMFSPKIGQLSRVPPKQRTPEALAKATEAMQSLDQAAFRGGFILEKIMGPISTGHLELRSRDPNQNPSVTFNYFQEPQDLERCVQGLSVVEKIIESKAFAPFRYPNMPVSVLLNMTANSPVNLLPKHTNSSLSLQQFCRDTVMTIWHYHGGCQVGRVVDRDYKVLGVDALRVIDGSTFNYSPGTNPQATVMMLGRYMGLQILSQRLGAPAADQTYQKTV* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2196 583 Gene3D - 163 508 - -
Pvu3g2196 583 Pfam GMC oxidoreductase 414 559 IPR007867 GO:0016614
Pvu3g2196 583 PANTHER OSJNBA0019K04.7 PROTEIN 11 570 - -
Pvu3g2196 583 SUPERFAMILY FAD/NAD(P)-binding domain 44 568 IPR036188 -
Pvu3g2196 583 SUPERFAMILY FAD-linked reductases, C-terminal domain 315 515 - -
Pvu3g2196 583 Gene3D - 46 558 IPR036188 -
Pvu3g2196 583 ProSitePatterns GMC oxidoreductases signature 2. 278 292 IPR000172 GO:0016614|GO:0050660
Pvu3g2196 583 PIRSF Alcohol_oxidase 20 577 IPR012132 GO:0050660
Pvu3g2196 583 Pfam GMC oxidoreductase 46 319 IPR000172 GO:0016614|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2196 Pvu-Chr3 42824694 42830650 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2196 26 569 Miscellaneous Gene Families AT5G51950 59.165 0.0 661
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2196 - - gmx:100796752 1039.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2196 3 42824694 42830650 Pvu3g2196 3 42824694 42830650 ECH