Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2179 ATGAACTCTCGCGAGGCTACTTTGGTTGCCACGGCAACTGTGATTGGCGCCATGGCCTCTGCAGTTGCTTTCCGCTTCTTCTGCCGCTCCCAAGCGCGCGCGAAATCATCCCAAAACGGCACCGTTTCCTCTGCTCAGGACCCTTTCGACCCTTCCAAGCGAAAAAGATATTTATCGTGGGATGACTATTTTATGGCAATTGCGTTTTTGTCAGCTGAGAGGTCCAAAGACCCTAACAGGCAGGTTGGGGCTTGTTTGGTGAGTCAAAATGGTATAATTCTTGGAATTGGTTATAATGGGTTTCCAAGGGGTTGCTCTGATGACAAGCTACCCTGGGCAAAGAAATCCAGGACTGGAAATCCTTTGGACACAAAATACCCTTATGTTTGTCATGCAGAAGTAAATGCTATTCTTAACACAAATCATGCCTCTGCTGCCGGACAAAGGCTATATGTGACCATGTTTCCCTGCAATGAATGTGCTAAGATCATAATCCAGTCAGGAGTTTCTGAAGTAATTTATTTTGTGGAGAAGAGATTAGAAAATTCAGATATGACATATATAGCCTCTCACAAGCTACTTTCATTAGCTGGTGTAAAGGTCAGGAAACATCAACCACTGATGAATGGAATTCATCTGAAGTTTGAGGAGAGATAG 657 0.4429 MNSREATLVATATVIGAMASAVAFRFFCRSQARAKSSQNGTVSSAQDPFDPSKRKRYLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQNGIILGIGYNGFPRGCSDDKLPWAKKSRTGNPLDTKYPYVCHAEVNAILNTNHASAAGQRLYVTMFPCNECAKIIIQSGVSEVIYFVEKRLENSDMTYIASHKLLSLAGVKVRKHQPLMNGIHLKFEER* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2179 218 CDD deoxycytidylate_deaminase 61 195 IPR035105 -
Pvu3g2179 218 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 59 201 IPR002125 -
Pvu3g2179 218 Pfam Cytidine and deoxycytidylate deaminase zinc-binding region 59 175 IPR002125 -
Pvu3g2179 218 ProSitePatterns Cytidine and deoxycytidylate deaminases zinc-binding region signature. 131 164 IPR016192 GO:0008270|GO:0016787
Pvu3g2179 218 SUPERFAMILY Cytidine deaminase-like 61 209 IPR016193 GO:0003824
Pvu3g2179 218 PANTHER DEOXYCYTIDYLATE DEAMINASE-RELATED 1 217 IPR015517 -
Pvu3g2179 218 Gene3D Cytidine Deaminase, domain 2 50 218 - -
Pvu3g2179 218 PANTHER CYTIDINE/DEOXYCYTIDYLATE DEAMINASE FAMILY PROTEIN 1 217 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2179 K01493 - gmx:100792003 405.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2179 3 42619691 42623355 Pvu3g2179 3 42619691 42623355 ECH