Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2178 ATGGAGATCGAACTCAAAGAGTTGAACGCCGATCTTCAATTTCTGAGCCAATCGCTTCCCGATCCATCTCACCATGCTTTGCTCCGCAAGATTCAATTGCGTGTTGATGACCTTGCCAAGCTTGCAGCGGCGGCACCTGTTCGACGCTCCAAAGTTGAGGATATGAGTGCTGAGGTTGTAGATAGCAATCCTTATAGTCGGCTTATGGCACTTCAGAGAATGGGTATTGTGGAGAACTATGAAAGAATACGCGATTTCTCCGTTGCCATAGTTGGGATAGGTGGTGTAGGAAGTGTCGCAGCTGAGATGCTGACTAGATGTGGCATAGGTCGACTTTTGTTGTATGATTATGACAAAGTGGAGCTTGCAAACATGAATAGGTTGTTCTTTCGTCCAGATCAGGTTGGTTTGACTAAGACTGATGCAGCTGTGCAGACTCTTTCAGACATAAACCCCGACGTTGTACTAGAGAGCTATACACTGAATATCACAACCGTCACAGGTTTTGAAACCTTTATGTCAAGTTTGAAAAAAAAATCATTTCGCCCCAATAAAGAAGGGAGTGGTGTGGATCTGGTTTTAAGTTGTGTGGATAATTATGAAGCAAGAATGGCTGTTAACCAGGCCTGTAATGAATTGAATCAAACATGGATGGAGTCAGGTGTTTCTGAGGATGCTGTTTCTGGCCATATTCAATTACTTATTCCTGGTGAAAGTGCCTGTTTTGCATGTGCACCTCCTCTGGTTGTTGCATCTGGAATAGATGAACGCACACTCAAGCGCGAAGGGGTCTGTGCTGCATCTTTACCCACCACTATGGGGGTTGTTGCTGGCCTTCTAGTCCAAAACACACTAAAATTATTGTTAGGCTTTGGACAAGTCTCTCCATATTTGGGATATAATTCTCTTAAGGATTTTTTCCCAACTATGCAAATGAAGCCAAACCCTCAATGTTCAAATGTTGCTTGCTTGAAAAGACAGGAAGAATACATGCTTGCAAAACCAGCAAGAGATGCTGCAGCAAAAGCAAAAATGGAAGCTGAAGTACTATCAACCGAGGAAGTGCCACTTCACGATGATAATGAGTGGAATATAAGTGTTGTTGATGATGTTGAGCTGGATGGTCCGGATACCAGAAGTTCAGATGTTCTGCCCGAAGGTCTCACACGTGAACTTCCTAGTGCAGACGAGTTTCATAAGGCAACTCTTGACTCTCCAGAAGCTAACAATGACGACCTTGAAGATCTTCGTAGGCAACTTGAAGCCATTAATTCTGCATAG 1281 0.4372 MEIELKELNADLQFLSQSLPDPSHHALLRKIQLRVDDLAKLAAAAPVRRSKVEDMSAEVVDSNPYSRLMALQRMGIVENYERIRDFSVAIVGIGGVGSVAAEMLTRCGIGRLLLYDYDKVELANMNRLFFRPDQVGLTKTDAAVQTLSDINPDVVLESYTLNITTVTGFETFMSSLKKKSFRPNKEGSGVDLVLSCVDNYEARMAVNQACNELNQTWMESGVSEDAVSGHIQLLIPGESACFACAPPLVVASGIDERTLKREGVCAASLPTTMGVVAGLLVQNTLKLLLGFGQVSPYLGYNSLKDFFPTMQMKPNPQCSNVACLKRQEEYMLAKPARDAAAKAKMEAEVLSTEEVPLHDDNEWNISVVDDVELDGPDTRSSDVLPEGLTRELPSADEFHKATLDSPEANNDDLEDLRRQLEAINSA* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2178 426 Gene3D - 82 344 - -
Pvu3g2178 426 MobiDBLite consensus disorder prediction 374 395 - -
Pvu3g2178 426 PANTHER BNAANNG16230D PROTEIN 1 426 - -
Pvu3g2178 426 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 1 426 IPR045886 -
Pvu3g2178 426 Pfam ThiF family 65 319 IPR000594 -
Pvu3g2178 426 CDD ThiF_MoeB_HesA_family 64 312 - -
Pvu3g2178 426 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 88 116 IPR029752 -
Pvu3g2178 426 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 60 324 IPR035985 GO:0008641
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2178 Pvu-Chr3 42612028 42617063 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2178 60 175 EF-hand Containing Proteins AT2G30110 33.613 2.28e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2178 K12164 - gmx:100816132 767.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2178 3 42612028 42617063 Pvu3g2178 3 42612028 42617063 ECH