Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2149 ATGTTACCTCCATTTCCTGTTCCTATTGCTATTGATATCAACGCTATAAAAGATAAGCTCTCCTTTCAGTTGCGACCTTGGCAACGTTCATTCCAATTCTGGGTTCGAGCCATTGACATTTACACCGGATACAAGGTGTTTCAAGTGAGAGTCAATTTCGTCAAAGATGTGCAGAAGCAGGAAGCAATGTGGGAACGACAGCACGAGCTTGCCGCCGACAAAATTTTCGCCTTGTGCTCTGACCTCGGAGGTTTCTTCCTCAAGATTGCCCAAATTGTAGGGAAGCCTGATTTGGCTCCGGCTGCATGGGTGAAAAGGCTTGTTACTCTGTGTGATAGGGCTCCTCCCACCCCTTTTGATGTGATGAAACTAGTTTTGGAGAGTGAGCTGGGACAGGGTATTGATAATGTGTTCGAGAGGTTCGATGTTGAACCCCTAGGTTCTGCTTCAATTGCTCAGGTTCATAGAGCAAGACTGAAAGGTGATACAAGTGATGTTGTCGTCAAGGTTCAACATCCTGGAATTCAGGATCTGATGATGACAGATATCCATAACTTGCAAGCATTTGCACTGTACATGCAAAAGACAGATATCAAATTTGATCTATATTCCGTGACTAAGGAAATGGAAAAACAGATTGGATATGAATTTGATTTCATGAGGGAGGCTGATGCGATGGAAAGGATAAGAAAGTTCTTGTATAAGAATAACAGAAAGACTCCGGTATTGGTGCCACGACTAATACGAGATATGGTTACTAGGAGGGTCCTAGTCATGGAATATATTGATGGGGTTCCAATAATGAACCTTGGTGACGAGATAGCTAAGAGAGGCATAAATCCTCGTGGTAAGGTTGCGGCAGCAGCAAAGCAGAAAATTCTTCAAAACTTGACTCTAGCATATGGTCAAATGATTTTAAAAAGTGGATTCTTCCATGCAGATCCTCATCCAGGAAACATCCTGATTTGTAAATCATCAGAGGTTGCCTTGCTAGACTACGGGCAGGTGAAGGATCTACCAGAACAGTTGAGGCTTGGCTATGCTAATCTAGTTCTTGCAATTGCTAATGGTGATCCATTAAGAGCTGCAGAGAGCTATAGGGAACTTGGTATTGAAACCTTGAGCAGTTGTGAAAATGGGCTACAAGAATTGTTTAAACTAGCAGAGACAATGTTCGATACAAAATTGCCTCCTGGGGTGGTAATGCTGCAACCTTTCTCAGATGAATCTTCAATTAAAAAAGTTGCTGTCAAGTCCTTTCCAGAAGAACTGTTTTCTGTACTTCGGACAGTGCATCTACTGAGGGGACTTAGCGTTGGACTTGGAATCAATTATTCTTGCGCAGAACAGTGGAGGCCCTTTGCAGAAGAAGCTTTGTCCCAAGCTGGCAGATTAAAAGATAAGAATGTTAAGACCAGAGGCAGGTAA 1428 0.4286 MLPPFPVPIAIDINAIKDKLSFQLRPWQRSFQFWVRAIDIYTGYKVFQVRVNFVKDVQKQEAMWERQHELAADKIFALCSDLGGFFLKIAQIVGKPDLAPAAWVKRLVTLCDRAPPTPFDVMKLVLESELGQGIDNVFERFDVEPLGSASIAQVHRARLKGDTSDVVVKVQHPGIQDLMMTDIHNLQAFALYMQKTDIKFDLYSVTKEMEKQIGYEFDFMREADAMERIRKFLYKNNRKTPVLVPRLIRDMVTRRVLVMEYIDGVPIMNLGDEIAKRGINPRGKVAAAAKQKILQNLTLAYGQMILKSGFFHADPHPGNILICKSSEVALLDYGQVKDLPEQLRLGYANLVLAIANGDPLRAAESYRELGIETLSSCENGLQELFKLAETMFDTKLPPGVVMLQPFSDESSIKKVAVKSFPEELFSVLRTVHLLRGLSVGLGINYSCAEQWRPFAEEALSQAGRLKDKNVKTRGR* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2149 475 SUPERFAMILY Protein kinase-like (PK-like) 112 337 IPR011009 -
Pvu3g2149 475 PANTHER - 13 472 - -
Pvu3g2149 475 Pfam ABC1 atypical kinase-like domain 110 364 IPR004147 -
Pvu3g2149 475 PANTHER ABC1 FAMILY PROTEIN 13 472 - -
Pvu3g2149 475 ProSiteProfiles Protein kinase domain profile. 140 475 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2149 475 CDD ABC1_ADCK3-like 110 365 - -
Pvu3g2149 475 Gene3D Transferase(Phosphotransferase) domain 1 137 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2149 Pvu-Chr3 42274450 42282721 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2149 K08869 - gmx:100813009 855.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2149 3 42274450 42282721 Pvu3g2149 3 42274450 42282721 ECH