Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2121 ATGGACTTCGACTTCAGGGCTAGTTTTCATTCTGTCAAACACCTCTCTGCTGTGCAAGCTGCTAGACTTCACTCTGATAATTATTCAGTGATCCACTACACAGATGTGGAAAATGATGGCCGGTGCGATTTCCGATGTCCTTCTTGTGATTTTGAAATTGAAGTTCCTCTACTCTGCTCTAATTTGGAGGAGGATCATTGCTATGCCCTAAAAAATGTGGTTTGTCCCGTGTGTGAAGAAAATTTAGGGAAGGATGCAATCATGCAATTTACACATTCAAATTCAAACTCTCGAAAGTGGGCGTGGAAGCCTGAGAAATCTAGCATCTGGTCTGGTAACGCAGCAATGCTTGGCAAGAAGCTGGCTACCAGGGGGAACAAACAAGAATCAATAACGGATCCACTCTTGACACCATTCATCTGCAACTCTATTCCAAACTTAAGCAATTTCCATCCAGATGAAAACTCCAGCTCCAGCAGCAAAGATATAAACACTCCTGATGCAAAAAGGTCTGGCAAAGATGAAGCAGATATAGGTGATGAGCAGGATCAGCAAGAGAAAAGGCTGAGGGCAGCTTTTGTTCAGCAGTTGTTATTCTCAACTATATTGGAGTAA 615 0.4276 MDFDFRASFHSVKHLSAVQAARLHSDNYSVIHYTDVENDGRCDFRCPSCDFEIEVPLLCSNLEEDHCYALKNVVCPVCEENLGKDAIMQFTHSNSNSRKWAWKPEKSSIWSGNAAMLGKKLATRGNKQESITDPLLTPFICNSIPNLSNFHPDENSSSSSKDINTPDAKRSGKDEADIGDEQDQQEKRLRAAFVQQLLFSTILE* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2121 204 Pfam Stress-induced protein Di19, C-terminal 125 202 IPR027935 -
Pvu3g2121 204 PANTHER PROTEIN DEHYDRATION-INDUCED 19 HOMOLOG 5 1 203 - -
Pvu3g2121 204 MobiDBLite consensus disorder prediction 150 187 - -
Pvu3g2121 204 MobiDBLite consensus disorder prediction 166 187 - -
Pvu3g2121 204 MobiDBLite consensus disorder prediction 150 165 - -
Pvu3g2121 204 PANTHER PROTEIN DEHYDRATION-INDUCED 19 1 203 IPR033347 -
Pvu3g2121 204 Pfam Drought induced 19 protein (Di19), zinc-binding 43 92 IPR008598 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2121 Pvu-Chr3 42003228 42008645 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2121 - - vun:114175178 392.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2121 3 42003228 42008645 Pvu3g2121 3 42003228 42008645 ECH
Pvu3g2121 3 42003228 42008645 Pvu9g1789 9 25225551 25230083 PCT