Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2110 ATGACAAGCAGCACCGCTTTATTTGCTGCTATTCTAAAACTTCTGATCATTTTCTTATTCGCAGCTTGGGTTTCTCTTTGGTTTCTGAAGCCAACCCAAATATGGACAAGAAAATGGAAACAATTAGAAAATAGCGCAGATAATACAATTTTTGGATACTATGGTCTTAGCTTCGCTGTGTACACGTTTCCAATAATTGCTATTGCAATAATTGGACTTCTTTTATTGGATTTAAAATCTGGATACCAAAGCAGAAGCGCAAGGAGTCCATCAAAATCAAACTTCTTCTCAAAGCCACTGGTGGTGAACAGCACAGTGGGAATCTTATCCATTATTGAAGTACTGGTAGCTTTCCTTTTTATTGTCTTCTTAGTATGGACCTACTACTCTCGTATTTCTGCAGACTTCAAAAAGTTGGTGCCATACAAATCACTGAAGTTGAATACATGGCAACTCAAGTATCACAGAGTAGCTACCCGGTTTGGCTTGCTATCAGAAGCTTGTCTGGCTTTGCTGCTCCTTCCTATTTTAAGAGGATTGGCTGTGTTTCGCATACTTGGCATTCAGTTTGAAGCTTCCGTTAGATATCACACTTGGCTCGGAACTGCAATGATACTTTTTGCTACAATACATGGTGCAAGCACTTTGTTGATATGGGGGGTCAGCCACCATATTCAGGATGAGATGTGGAAGTGGCAAAAGACTGGACGCATATACCTCGCGGGGGAGATAGCACTTGTTGTGGGGCTAGTCATTTGGGTCACTTCTCTTCCCCAAATTAGAAGGAGAAAGTTTGAAATCTTCTACTACACACATCATTTCTATGCAATCTTTCTTGTATTTTTCTTATTTCACGGTGGGGATAGGCACTTTTATACGGTTTTCCCAGGAATATTCCTTTTTAGCCTTGACAAATTGATCCGAATCATACAATCAAGTCCAAAAACTAGCATGGTTTCTGCTAGAATTTTTCCTGGCAAAGCTGTAGAGCTAATTCTGCCCAAAGATCCAGGGCTGAAATATAACCCTACAAGTGTTATATTTTTGAAGATACCAACCATATCTCATCTTCAATGGCACTCTTTCAGTATAATATCTAGTTCCAGGGCTGATGACCACATTTTGTCAGTGATAATAAAATGTGAAGGGTGGTGGACTAATTCTCTTTACGACCTGATACATGCTGAACTAGACAAAACTGAAGATAAAAGGAAGGGAATACCTGTTGCAATCGAAGGACCTTATGGACCTGCTTCTTTAGACTTCTTGAGATATGACACCCTTCTTCTGGTTGCTGGAGGAAGTGGAATAACCCCATTTCTGAGCATTTTGACAGAAGCTAATTCAGCTAACAGCAAAAGTGGATTTCCATCGAGAATACAACTTGTGTATGTCATCAAGAAAGCACAAGATTTCTGTCTGTTACATTCAGTCTCACATCTGTTACTCAACCGATCAACTAAAAGTTTTCATTTGAACCTAAAATTGTTTGTAACCCGAGAAACACAAGCAGGGGTAGGAATTAGAGAGCTACTAAATGAGTTCTTTAAAGCAAGAACCCTGCAAGTGAACAGCGTGTGTTCAAATTATGCAGCATACGGGCCTGAAAGTCCCTCTTGGATGGCTGCCATTGCTGGATTTTGCTCCATTACTTTCCTTATTTTCCTAATCTTTTTAAACCATATTATAATTCCATCTGGAAAGCGCTCAAAACTGGACAAAGAAAAGACTCCCTCTTGGGTTGTCGATCTTCTTCTGATAGCTGCTTTTGTCCTAGCTTTAGCCTGCAGCGCCTCGGTGGCAGGCTTTTTGAGATGGAGAAGGCTGAGGAAAGGGATTCCCAAAATATCGCACAGAGAAATTGAAGCCCTTGATCTAAGTTCAGCTGAAGCTAGGAATGCACTTGAAGCTCACGAAGTACATTTTGGGGGAAGGCCTAACTTTAAAGAAATATTCAGCAAGCTCCAAAATGAAAGCGGTGGATCTAATATTGGAGTATTGGTTTGTGGACCTGAAAGCATGAAGGAATCGGTGGCGTTGGCATGCCAGCAGGAATCCGAGTGTTTTAAGACAAGTGCAAAGAGAACACAATCCTGCTTCACTTTCCACACTCTCAACTTCACGCTTTAG 2130 0.408 MTSSTALFAAILKLLIIFLFAAWVSLWFLKPTQIWTRKWKQLENSADNTIFGYYGLSFAVYTFPIIAIAIIGLLLLDLKSGYQSRSARSPSKSNFFSKPLVVNSTVGILSIIEVLVAFLFIVFLVWTYYSRISADFKKLVPYKSLKLNTWQLKYHRVATRFGLLSEACLALLLLPILRGLAVFRILGIQFEASVRYHTWLGTAMILFATIHGASTLLIWGVSHHIQDEMWKWQKTGRIYLAGEIALVVGLVIWVTSLPQIRRRKFEIFYYTHHFYAIFLVFFLFHGGDRHFYTVFPGIFLFSLDKLIRIIQSSPKTSMVSARIFPGKAVELILPKDPGLKYNPTSVIFLKIPTISHLQWHSFSIISSSRADDHILSVIIKCEGWWTNSLYDLIHAELDKTEDKRKGIPVAIEGPYGPASLDFLRYDTLLLVAGGSGITPFLSILTEANSANSKSGFPSRIQLVYVIKKAQDFCLLHSVSHLLLNRSTKSFHLNLKLFVTRETQAGVGIRELLNEFFKARTLQVNSVCSNYAAYGPESPSWMAAIAGFCSITFLIFLIFLNHIIIPSGKRSKLDKEKTPSWVVDLLLIAAFVLALACSASVAGFLRWRRLRKGIPKISHREIEALDLSSAEARNALEAHEVHFGGRPNFKEIFSKLQNESGGSNIGVLVCGPESMKESVALACQQESECFKTSAKRTQSCFTFHTLNFTL* 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2110 709 Pfam Ferric reductase like transmembrane component 162 282 IPR013130 -
Pvu3g2110 709 Pfam Ferric reductase NAD binding domain 425 682 IPR013121 GO:0016491
Pvu3g2110 709 Gene3D - 409 543 IPR039261 -
Pvu3g2110 709 Gene3D - 597 707 IPR039261 -
Pvu3g2110 709 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 409 522 IPR039261 -
Pvu3g2110 709 CDD NOX_Duox_like_FAD_NADP 319 472 - -
Pvu3g2110 709 SFLD Ferric Reductase Domain 31 686 - -
Pvu3g2110 709 PANTHER FERRIC REDUCTION OXIDASE 8, MITOCHONDRIAL 3 708 - -
Pvu3g2110 709 SUPERFAMILY Riboflavin synthase domain-like 319 417 IPR017938 -
Pvu3g2110 709 SFLD Ferric reductase subgroup (FRE) 7 686 - -
Pvu3g2110 709 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 296 421 IPR017927 GO:0016491
Pvu3g2110 709 PANTHER NADPH OXIDASE 3 708 - -
Pvu3g2110 709 Pfam FAD-binding domain 317 419 IPR013112 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2110 Pvu-Chr3 41890569 41893759 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2110 182 709 Miscellaneous Gene Families AT5G50160 47.920 1.86e-178 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2110 K00521 - gmx:100816560 1202.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2110 3 41890569 41893759 Pvu3g2110 3 41890569 41893759 ECH