Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2098 ATGGAGTCCCCAATCTCAATCTGCGACGCAGAGATTTCTCTTCAAACGCAAAACATCGACGCTTTCACCGCTTCTTTCGCCGAATCCCTTCATTCTCTCCTTCCCATTGCGCAAGAAACCGCTCGCTGTCAAGTTCAACTAGACGAGGTAAAAGCTAAACTCAGAGACACCGAGGATGATTTGGTCAAAGCACTTGCAGTCAAGACTCGCAAAGAGGCCAAGCGAATGGCGTTGGTGGATGCTGTTGCTTCTGCAAAGGCTAGAGTTGAAGTCCTCAATGCAAGTATTCAGGAGCAGCGTACCAAAAAACAAGAATATGCTGCAATTATATCTCAACAATCTCTTGCTTTGGCTGCATCTAAATGGAAATTAAATGAAAGCGTTGAACAGAAAGATGAAACGCAAGAGGTCATTTCCTGGTACAATAGGGTCCTTGGTTTTCATGTAAAAGGCGGACGTGGGGTAAAATTCACATTCAAGAATATAAATCTGAACAATCCAAATGAGGAGTACTTTTTTACTATCTTCCATGAAAAGGATACATATTCATTATTGAGTTGTGAACCTTCCCTCAGTGAAACCAAAGAGTTGATCCACGAATTAAACAACACAAATGATCTATTTAAATTTGTCAGAGCAATGAGGAAAAAGTTCCAAGAAGCAGTGGCACAAGGGAGTTTAGTCGTGACAGATGGTGAACATGAACAGTCTGCTTTTAACTCTGCATCTGCTCCAGTTTTGTCAATGTCATCTGTTAGAAGTGATTTTCTGGGCAAGGAAAATGAGTATCAAGTTGAACCTGCAGAAGGTAATACAAAAGTCGGAAAAAAGCATCATAGAAGGATAAGTGAAGTCTTATCTCCTGGATCTGCATCATCTGTTCGCCAGTTTTCTCGTTGA 900 0.4133 MESPISICDAEISLQTQNIDAFTASFAESLHSLLPIAQETARCQVQLDEVKAKLRDTEDDLVKALAVKTRKEAKRMALVDAVASAKARVEVLNASIQEQRTKKQEYAAIISQQSLALAASKWKLNESVEQKDETQEVISWYNRVLGFHVKGGRGVKFTFKNINLNNPNEEYFFTIFHEKDTYSLLSCEPSLSETKELIHELNNTNDLFKFVRAMRKKFQEAVAQGSLVVTDGEHEQSAFNSASAPVLSMSSVRSDFLGKENEYQVEPAEGNTKVGKKHHRRISEVLSPGSASSVRQFSR* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2098 299 Coils Coil 82 102 - -
Pvu3g2098 299 MobiDBLite consensus disorder prediction 262 299 - -
Pvu3g2098 299 Pfam Chromosome segregation protein Spc25 151 219 IPR013255 GO:0007059|GO:0031262
Pvu3g2098 299 Coils Coil 47 67 - -
Pvu3g2098 299 PANTHER KINETOCHORE PROTEIN SPC25-RELATED 8 276 IPR045143 GO:0007059|GO:0031262
Pvu3g2098 299 Gene3D Chromosome segregation protein Spc25 126 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2098 Pvu-Chr3 41721174 41725498 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2098 K11550 - gmx:100776032 473.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2098 3 41721174 41725498 Pvu3g2098 3 41721174 41725498 ECH
Pvu3g2098 3 41721174 41725498 Pvu9g1814 9 25618487 25625106 PCT