Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2087 ATGGGTTCCATTTGGATGTGCCATTTCTTTCTGTTACTGTCCATACTAAATACTTCTTTTATTTCAATTATGGCCAACAATGCAACAGATTCCTACTGGCTTCTCAGAATTAAATCAGAATTGGTAGATCCATTAGGAGCACTTGGCAACTGGTCTCCATCAACTCATGTCTGCAACTGGAATGGAATAACATGTGCAGCTGATCAGGAACATATTATTGGCCTGAATCTGTCGAGTTCAGGAATATCCGGTTCCATTTCAGTTGAGTTCGGTCACCTTGCTTCTATTCAAACTCTTGATTTGTCTTCAAATTCTCTTTCTGGCTCCATCCCTTCGGAGCTGGGGGAGCTTCAAAATCTAAGAATATTGCAACTATACTCAAATGATATCTCTGGGAACATTCCTGCAGAGATAGGTAACATGAGGAAGTTGCAAATTCTTAGAATAGGGGACAACATGTTGACAGGTGAAATTCCACCTAGTATTGCCAATATGAGTGAATTGACAGTTTTGGCAATAGGATACTGCCACTTGAATGGAAGCATACCAGTTGGGATTGGAAAATTGAAGCATCTAATATCTCTTGATTTACAAATGAACAGCCTTGGTGGCCCCATACCTGAAGAGATTCAAGGCTGTGAAGAACTCCAAAACTTTGCAGCATCAAACAACATGTTTGAAGGAGACATACCTTTCTCTATGGGGTCTCTTAAATCATTGAAAATTCTGAACCTGGCCAATAACAGTTTATCTGGATCAATTCCTCCAGCTTTGAGTCATCTTTCTAACTTGACATACCTGAATTTGCTCGGAAACAAACTACATGGAGAAATTCCTTCTGTGCTTAATAGTCTGATTCAGCTGCAGAAGTTAGACTTGTCCAAAAACAACCTCTCTGGATCAATACCTCTCCTTAATGTAAAATTGCAAAGTCTTGAAGCTCTAGTTCTGTCTGATAATGCTTTGACAGGTAGCATTCCAAATAACTTCTGCCTCAGAGGTTCAAAGCTTCAACAACTTTTTTTGGCTAGAAACATGCTCTCTGGCAAGTTTCCTTTGGAGCTACTCAACTGCCCCTCAATCCAACAGTTGGACCTTTCTGATAACAGTTTTGAAGGAGAACTTCCTGCAAGCCTGGACAAACTGAATAGCCTCACATATCTCGTTCTCAACAACAACAGCTTTGTTGGATCTCTACCTCCCGAAATTGGGAACATTAGTAGCTTAGAGGGTCTTTTCCTATTTGGTAACTTCTTGACAGGTAAAATTCCAATGGAGATTGGAAGGCTGCAGAGATTGAGCACCATTTACCTCTATGACAACCAGATGTCTGGACTCATACCAAGAGAGATAACAAACTGCACAAGCTTAGAGGAAATTGACTTCTTTGGTAATCACTTCACAGGGCCCATTCCGGAGACTATAGGTAAGCTCAAGGACTTAGTTGTTCTGCATCTTAGGCAGAATGACTTGTCTGGTCCGATCCCACCAAGCATGGGGTACTGTAAAAGCCTTCAGATATTGGCCTTAGCAGATAACATGTTGTCTGGTTCCATTCCACCTACATTCAGTTACCTCTCGGAACTCACCAAAATTACCCTTTACAACAACTCCTTTGAAGGACCTCTCCCTCATTCACTCTCTTCTCTCAAGAGCCTCAAAATCATCAACTTTTCAAACAACAAGTTCAGTGGAAGTTTCTTTCCTCTCACTGGTTCAAATTCTCTTACCATTCTGGATTTGACCAACAACAGCTTCTCAGGTCCCATCCCTTCCACTCTAGCCAATTCTAGAAACCTCAGCCGTCTCAGACTTGGAAAAAATTATCTCACCGGAAGCATTCCTTCTGAATTTCACCAACTAACTGAGCTCAATTTTCTTGATTTATCATTCAACAATTTAACAGGAGAGATGCCACCTCAACTCTTGAACTCCAAGAAAATTGAACACATCCTGATGAGTAACAACAGGTTGAGTGGCAAATTACCTGTTTGGTTGGGAAGCTTACAAGAACTTGGTGAGCTAGATCTCTCATACAATAGCTTCAGTGGGAGGGTACCTTCTGAGCTTGGTAACTGCTCAAAATTGCTCAAGCTTTCTCTCCATCACAACAATCTCTCCGGTGAAATCCCACAAGAGCTTGGAAACCTCACTGCCCTCAATGTCTTCAATTTGCAAAGGAACGGATTCTCTGGCCCCATTCCTCCAACAATTCAGCAATGCACAAAACTGTATGAGCTTAGGCTCTCAGAGAACTTTTTAACAGGTACCATACCAGTTGAGCTAGGAGGGCTTGCTGAGTTGCAAGTGATATTGGACTTGAGTAAAAATCTATTTACTGGTGAGATTCCACCATCTCTAGGAAACCTCATGAAGCTAGAGAGACTCAACCTCTCTTTCAACCAACTTAAAGGAAACGTTCCTCCTTCACTAGGCAAACTCACAAGCCTGCACGTGTTGAATCTCTCAAACAACCATCTTGAAGGCCAGATTCCTCCAACATTTTCAGGATTCCCACTAAGCTCATTCCTGAACAATCACGGCTTGTGTGGCCCACCACTGAGATCATGCTCAGAATCTACGGCGCTGGGGGAAATGCAGCTATCAAACAAACAAGTGGCAGCGATCATTGTGGCCATTGTCTTTACTTCCACAGTGATATGCTTAGTGATGTTATACATCATGCTCAGGATCTGGTGCAACTGGAGAAAAGTGGCCATTTCAAGTGCAGAAGGTGGCACTGTTGCCCACAAGGCAAGGAATGGAGAGTATTGGAATATGAACTCATTTGGGTTGATTCCTTCACCAGATAAGCAGAATTCAGCAACAACAACTTCCTTCTATAATCTTAAAATGGAAACAATGGAAAATACACATATGTAA 2883 0.4187 MGSIWMCHFFLLLSILNTSFISIMANNATDSYWLLRIKSELVDPLGALGNWSPSTHVCNWNGITCAADQEHIIGLNLSSSGISGSISVEFGHLASIQTLDLSSNSLSGSIPSELGELQNLRILQLYSNDISGNIPAEIGNMRKLQILRIGDNMLTGEIPPSIANMSELTVLAIGYCHLNGSIPVGIGKLKHLISLDLQMNSLGGPIPEEIQGCEELQNFAASNNMFEGDIPFSMGSLKSLKILNLANNSLSGSIPPALSHLSNLTYLNLLGNKLHGEIPSVLNSLIQLQKLDLSKNNLSGSIPLLNVKLQSLEALVLSDNALTGSIPNNFCLRGSKLQQLFLARNMLSGKFPLELLNCPSIQQLDLSDNSFEGELPASLDKLNSLTYLVLNNNSFVGSLPPEIGNISSLEGLFLFGNFLTGKIPMEIGRLQRLSTIYLYDNQMSGLIPREITNCTSLEEIDFFGNHFTGPIPETIGKLKDLVVLHLRQNDLSGPIPPSMGYCKSLQILALADNMLSGSIPPTFSYLSELTKITLYNNSFEGPLPHSLSSLKSLKIINFSNNKFSGSFFPLTGSNSLTILDLTNNSFSGPIPSTLANSRNLSRLRLGKNYLTGSIPSEFHQLTELNFLDLSFNNLTGEMPPQLLNSKKIEHILMSNNRLSGKLPVWLGSLQELGELDLSYNSFSGRVPSELGNCSKLLKLSLHHNNLSGEIPQELGNLTALNVFNLQRNGFSGPIPPTIQQCTKLYELRLSENFLTGTIPVELGGLAELQVILDLSKNLFTGEIPPSLGNLMKLERLNLSFNQLKGNVPPSLGKLTSLHVLNLSNNHLEGQIPPTFSGFPLSSFLNNHGLCGPPLRSCSESTALGEMQLSNKQVAAIIVAIVFTSTVICLVMLYIMLRIWCNWRKVAISSAEGGTVAHKARNGEYWNMNSFGLIPSPDKQNSATTTSFYNLKMETMENTHM* 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2087 960 Pfam Leucine rich repeat 575 634 IPR001611 GO:0005515
Pvu3g2087 960 SUPERFAMILY L domain-like 569 855 - -
Pvu3g2087 960 ProSiteProfiles Leucine-rich repeat profile. 239 262 IPR001611 GO:0005515
Pvu3g2087 960 Pfam Leucine Rich repeats (2 copies) 792 827 IPR025875 -
Pvu3g2087 960 ProSiteProfiles Leucine-rich repeat profile. 287 309 IPR001611 GO:0005515
Pvu3g2087 960 Gene3D Ribonuclease Inhibitor 182 304 IPR032675 -
Pvu3g2087 960 Gene3D Ribonuclease Inhibitor 27 181 IPR032675 -
Pvu3g2087 960 Gene3D Ribonuclease Inhibitor 523 861 IPR032675 -
Pvu3g2087 960 Gene3D Ribonuclease Inhibitor 305 522 IPR032675 -
Pvu3g2087 960 Pfam Leucine Rich Repeat 239 261 IPR001611 GO:0005515
Pvu3g2087 960 SUPERFAMILY RNI-like 75 395 - -
Pvu3g2087 960 SMART LRR_typ_2 669 693 IPR003591 -
Pvu3g2087 960 SMART LRR_typ_2 309 333 IPR003591 -
Pvu3g2087 960 SMART LRR_typ_2 814 837 IPR003591 -
Pvu3g2087 960 SMART LRR_typ_2 621 645 IPR003591 -
Pvu3g2087 960 SMART LRR_typ_2 790 813 IPR003591 -
Pvu3g2087 960 SMART LRR_typ_2 478 502 IPR003591 -
Pvu3g2087 960 SMART LRR_typ_2 189 212 IPR003591 -
Pvu3g2087 960 SMART LRR_typ_2 285 308 IPR003591 -
Pvu3g2087 960 SMART LRR_typ_2 93 117 IPR003591 -
Pvu3g2087 960 SMART LRR_typ_2 237 261 IPR003591 -
Pvu3g2087 960 SMART LRR_typ_2 382 406 IPR003591 -
Pvu3g2087 960 PRINTS Leucine-rich repeat signature 288 301 - -
Pvu3g2087 960 PRINTS Leucine-rich repeat signature 814 827 - -
Pvu3g2087 960 SUPERFAMILY L domain-like 334 650 - -
Pvu3g2087 960 PANTHER - 636 954 - -
Pvu3g2087 960 PANTHER - 1 448 - -
Pvu3g2087 960 PANTHER - 444 638 - -
Pvu3g2087 960 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 444 638 - -
Pvu3g2087 960 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 1 448 - -
Pvu3g2087 960 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 636 954 - -
Pvu3g2087 960 Pfam Leucine rich repeat N-terminal domain 29 65 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2087 Pvu-Chr3 41558405 41561287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2087 43 858 Receptor kinase-like Gene Family AT5G46330 36.087 1.40e-130 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2087 - - gmx:100818792 1657.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2087 3 41558405 41561287 Pvu3g2087 3 41558405 41561287 ECH
Pvu3g2087 3 41558405 41561287 Pvu9g1821 9 25710559 25713433 PCT