Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2083 ATGGCGAACGCGAGTGACGCTGGCGTCGAAGCCCTAAGGCGCCTGAAAGCGACGGATCCGCCCTCATGGCTGGCGCCGAACGTGGAGCTGTCGGAAGCTGCTCGTACGGCGTCCCAATACTTGTTTTCTACCCTCCAACCATTTTCCCCTAAATCGCCATTGGACCAACTCCTCGTGGAAGGTTTCGATGCCGAACAGATATGGCAACAAATCGACCTCCAATCACAGCCTCTGTTATCCACCCTGCGCCGCCGCTTGAAGCAGCTGTCTGAAAATCCTGAAGAGATTTCCCAGCTGAAGGTTCCTTCGAAGAGTGGGAGCAAGGTGGAGCAAAATAGTAGAGACGAGTGGGAGGGAGATAGTGACGGTTTTGACGAGGAGTTGGATGAGGAAGAGGAAGAGGAAGGAGACGAGGACGAAGGAAAGGAGGGAGAAGAAGAAAGAATGGAAGTGGAAGAGGAAGATGAAGTAGAAGAAGAAGAAGAAGAGGAAGAGGAGAATGAAGATGGCGGTGGCATTGAGGATAAATTCTTGAAAATAGATGAATTGGCGAAGTACTTAGATAAGGAGGAAGAGGATTTTGAGAATGGTGAGGCAGACAGAGAAGGTGAGGAGGAAGATGATGACGAGGAAAGTGATGAGGATGGTGATTTTGGGTCTGGTGACGAAGATGATGTAGATGAAGAAGCAGAGAACATGGAAAGTGCAAGGTATGAAGACTTCTTTGGAGGTAAAAAGGAAAGGGGCTCAAAAAGAAAAGCTCAAGTACTTCGGGAATCTAAATATTCCGAAGATGAGGATGACATGGAATTTGACAATGAGAAGAAAGGGACTGCATCTGCCCACGAAAAGCAGCTGGAAAAAATTCAATCCAAGATAGAGCAGATGGAGAAAGCTAACATAGATCCAAAAACATGGACTATGCAGGGTGAGGTAACTGCAGCAAAGAGACCCAAAAATAGTGCATTGGAAGTTGATCTAGACTTTGAGCACAATGTGAGGCCTGCTCCTGTAATCACTGAGGAAGTTACAGCTTCAATTGAGGATATGATCAAGAAAAGGATTATTGAGGGGCTTTTTAATGATGTTCAAAGGCTTTCTAAATTGCCATCTAAAGTGCCTCGGGAAGTTAAAGAGTTGGATGACAATAAAAGCAAACAGGGTCTCGCAGAAATTTATGAGCAAGAATATGTTCAGAAGACAGACCCCACATCTGCTCCATTGTCTTTTAAAGATGAACAAAAGAATGAGGCTAGCATGCTGTTTAAGAGACTCTGTCTGAAGCTGGATGCCCTATCTCATTTTAACTTTGCCCCAAAACCTGTTATAGAGGACATGTCTATTCAAGCTAATGTTCCTGCTCTGGCAATGGAAGAAATTGCTCCTGTGGCTGTTTCAGATGCTGCTATGTTGGCTCCAGAAGAGGTGTTTGATGGCAAGGGTGATATTAAGGAAGAAGTGGAGCTTACGCAGGCAGAAAGGAAAAGAAGGAGAGCTAACAAGAAAAGAAAATTTAAAGATGAGGCAGTAAAAAAGACAAAAAAGAAGGCACAAGAAGGTGCAATTCATAGTCCAGTTAAAGGGTAA 1587 0.448 MANASDAGVEALRRLKATDPPSWLAPNVELSEAARTASQYLFSTLQPFSPKSPLDQLLVEGFDAEQIWQQIDLQSQPLLSTLRRRLKQLSENPEEISQLKVPSKSGSKVEQNSRDEWEGDSDGFDEELDEEEEEEGDEDEGKEGEEERMEVEEEDEVEEEEEEEEENEDGGGIEDKFLKIDELAKYLDKEEEDFENGEADREGEEEDDDEESDEDGDFGSGDEDDVDEEAENMESARYEDFFGGKKERGSKRKAQVLRESKYSEDEDDMEFDNEKKGTASAHEKQLEKIQSKIEQMEKANIDPKTWTMQGEVTAAKRPKNSALEVDLDFEHNVRPAPVITEEVTASIEDMIKKRIIEGLFNDVQRLSKLPSKVPREVKELDDNKSKQGLAEIYEQEYVQKTDPTSAPLSFKDEQKNEASMLFKRLCLKLDALSHFNFAPKPVIEDMSIQANVPALAMEEIAPVAVSDAAMLAPEEVFDGKGDIKEEVELTQAERKRRRANKKRKFKDEAVKKTKKKAQEGAIHSPVKG* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2083 528 MobiDBLite consensus disorder prediction 119 171 - -
Pvu3g2083 528 Pfam Mpp10 protein 264 512 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Pvu3g2083 528 Pfam Mpp10 protein 50 273 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Pvu3g2083 528 Coils Coil 114 134 - -
Pvu3g2083 528 MobiDBLite consensus disorder prediction 235 264 - -
Pvu3g2083 528 MobiDBLite consensus disorder prediction 90 285 - -
Pvu3g2083 528 Coils Coil 279 299 - -
Pvu3g2083 528 Coils Coil 187 207 - -
Pvu3g2083 528 MobiDBLite consensus disorder prediction 90 108 - -
Pvu3g2083 528 PANTHER U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN MPP10 3 518 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Pvu3g2083 528 Coils Coil 489 509 - -
Pvu3g2083 528 MobiDBLite consensus disorder prediction 489 528 - -
Pvu3g2083 528 MobiDBLite consensus disorder prediction 496 510 - -
Pvu3g2083 528 MobiDBLite consensus disorder prediction 172 192 - -
Pvu3g2083 528 PIRSF snoRNP_Mpp10 5 276 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Pvu3g2083 528 PIRSF snoRNP_Mpp10 250 526 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Pvu3g2083 528 MobiDBLite consensus disorder prediction 193 234 - -
Pvu3g2083 528 Coils Coil 142 170 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2083 K14559 - gmx:100781093 722.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2083 3 41531629 41537921 Pvu3g2083 3 41531629 41537921 ECH