Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2073 ATGGCGCACACAGGTAACAGTTCAATGCACGGGTCGAGTTCTCGGCCTCAGTTGTTGGATCTCAGCAAAGCAGAAATTCAAGGAAACGTGGAAGAGAAGTACCCATCTATTTTGTTACCCAATCAGTCTCATGATATATCGTACCTCGCTCTTGACATTGGAGGATCTCTTATAAAGTTGATGTACTTTTCAAGACACCAAGATCAATCAACCAATGATAAAAGGATGAGAAATGTGAAGAATCGTCTGGGATTTCCCAGTAACAGGAGAAGCTATCCTATTCTTGGTGGAAGGCTTCATTTCGTGAAGTTTGAGACTGGGAAGATTAACGAGTGCTTAGACTTCATTTATTCAAAAAGGCTTCACTTCGGTGGAGGGGAATCTCGTTATTCTGATGGCTCAACTGAATTAAATGCCATAATTAAGGCTACTGGTGGTGGAGCACACAAATTTGCTGACCTTTTCAAAGAAAGACTTGGACTTATTCTGGACAAAGAAGATGAAATGAGCTGTCTCGTGGCAGGAGCAAATTTCTTGCTGAAGGCGATTCGTCATGAAGCTTTTACCCACATGGAGGGCCAGAAAGAGTTTGTTCAAATTGACCATAATGATTTGTTTCCTTATCTTCTAGTCAATATTGGGTCTGGTGTTAGTATGATCAAGGTTGATGGGGATGGAAAATTTGAGAGGATCAGTGGGACTAATGTTGGTGGTGGTACTTATTGGGGCTTGGGAAGGCTGTTAACAAAGTGTGAGAGTTTCGATGAATTGCTTGAGCTGAGTCAGAAGGGAGATAATAGGAATACTGACATGCTTGTCGGGGACATTTATGGTGGCATGGACTATGCTAAGATTGGCCTATCGGCTTCTACCATTGCTTCAAGTTTTGGCAAGGCTACCTCAGAAAAAAAGGGACTTGAAGATTACAGACCTGAAGATATATCACTCTCTCTTCTGCGAATGATATCATACAATATTGCCCAAATAGCCTACTTAAATGCATTGCGATTTGGGTTGAAGCGAATATTTTTTGGAGGATTTTTTATAAGGGGTCATGCCTATACCATGGATGCTATTTCTTTTGCAATTCATTTCTGGTCTAATGGGGCTGCACAAGCAATGTTTTTGCGACATGAAGGATTTCTGGGAGCATTAGGTGCATTTATGAGCTACGAAAAGCATGGTTTAGATGACCTCATGGTGCATCAATTAGTTGAAAGATTCCCAATGGGTGCTCCCTATACAGGAGGCAATATTCATGGTCCCCCACTTAGAAATTTGAATGAGAAGATTTCTTGGATGGAGAAGTTTCTGCAGAAGGGAACTGAGATCACTGCCCCTGTGCCGATGACTCGTCCTGGAACCACTGGACTTGGGGGTTTTGAAGTTCCTTTGTCAAAAGGAAGTATTCTGCGGTCCGATGCTAGTGCTCTAAATGTTGGTGTCCTTCATCTAGTACCCACTTTAGAGGTGTTTCCATTATTAGCAGACCTGAAAATGTATGAACCTAATACTATTGATCTCTCAGATCCCAATGAATTAGAGTATTGGTTCAAAATTTTGTCGGAGAATTTGCCTGATCTTGTGGCCAAGGCTGTAGCAAGTGAAGGTGGGACTGATGATGCCAAAAGAAGGGGTGATGCTTTTGCTCGTGCATTTTCTGCCCACCTGACTAGGTTAATGGAGGAGCCTGCTGCATACGGCAAGTTAGGCCTGGCCAGACTACTGGAAATGAGGGAAGAGTGCTTGAGGGAATTCCATTTTTTTGATGCTTATATAAGTATAAAGCAGAGGGAAAATGAGGCATCAATCGCTGTCTTACCTGATTTGTTGATGGAGCTTGATAGTCTGGATGAGGAAACAAGACTACTTACTCTAATCGAAGGTGTTCTTGCTGCAAACATTTTTGACTGGGGATCTCGTGCATGTGTGGATCTCTATCTTAAAGGAACTATTATTGAAATTTACAGAATGAGTCGCAACAAAATGCAGAGACCTTGGCGAGTGGATGACTTTGATGTCTTTAAAGAGAGAATATTAGGAACTGGGGACAAGAAACCACCCCCACATAGAAGAGCTTTACTTTTTGTGGATAATTCAGGTGCTGACATTGTTCTTGGGATGCTTCCCCTGGCACGAGAACTCCTCCGTCGTGGAACTGAAGTGGTCCTGGTTGCAAATTCCCTTCCTGCTTTGAATGATGTCACTGCAATGGAGCTTCCTGACATTGTTGCTGAGGCTGCCAAGCACTGTGACATTCTTCGGCGAGCTGCTGAATCTGGTGGCTTGCTTGTTGATGCAATGAGTACTACCTTGGACAGTCCAAGAGAAAATCCATCTTCTGTTCCCTTGATGGTTGTTGAAAATGGGTGTGGTAGCCCATGTATAGACTTTAGACAGGTCAGCTCCGAGCTGGCTGCTGCTGCAAAAGATGCCGATTTGATAATTTTGGAAGGAATGGGTAGAGCTCTTCATACCAATCTCAATGCCCAGTTTAAGTGTGATGCTTTGAAGCTTGCAATGGTGAAAAATCAGAGATTTGCTGAAAAGTTGATTAAAGGGAACTTATATGACTGTATTTGCAAATACGAGCCTGCTAACTGA 2604 0.4278 MAHTGNSSMHGSSSRPQLLDLSKAEIQGNVEEKYPSILLPNQSHDISYLALDIGGSLIKLMYFSRHQDQSTNDKRMRNVKNRLGFPSNRRSYPILGGRLHFVKFETGKINECLDFIYSKRLHFGGGESRYSDGSTELNAIIKATGGGAHKFADLFKERLGLILDKEDEMSCLVAGANFLLKAIRHEAFTHMEGQKEFVQIDHNDLFPYLLVNIGSGVSMIKVDGDGKFERISGTNVGGGTYWGLGRLLTKCESFDELLELSQKGDNRNTDMLVGDIYGGMDYAKIGLSASTIASSFGKATSEKKGLEDYRPEDISLSLLRMISYNIAQIAYLNALRFGLKRIFFGGFFIRGHAYTMDAISFAIHFWSNGAAQAMFLRHEGFLGALGAFMSYEKHGLDDLMVHQLVERFPMGAPYTGGNIHGPPLRNLNEKISWMEKFLQKGTEITAPVPMTRPGTTGLGGFEVPLSKGSILRSDASALNVGVLHLVPTLEVFPLLADLKMYEPNTIDLSDPNELEYWFKILSENLPDLVAKAVASEGGTDDAKRRGDAFARAFSAHLTRLMEEPAAYGKLGLARLLEMREECLREFHFFDAYISIKQRENEASIAVLPDLLMELDSLDEETRLLTLIEGVLAANIFDWGSRACVDLYLKGTIIEIYRMSRNKMQRPWRVDDFDVFKERILGTGDKKPPPHRRALLFVDNSGADIVLGMLPLARELLRRGTEVVLVANSLPALNDVTAMELPDIVAEAAKHCDILRRAAESGGLLVDAMSTTLDSPRENPSSVPLMVVENGCGSPCIDFRQVSSELAAAAKDADLIILEGMGRALHTNLNAQFKCDALKLAMVKNQRFAEKLIKGNLYDCICKYEPAN* 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2073 867 Pfam Fumble 49 389 IPR004567 GO:0004594|GO:0005524|GO:0015937
Pvu3g2073 867 Gene3D - 41 199 - -
Pvu3g2073 867 PANTHER PANTOTHENATE KINASE 6 789 IPR004567 GO:0004594|GO:0005524|GO:0015937
Pvu3g2073 867 SUPERFAMILY Actin-like ATPase domain 47 186 IPR043129 -
Pvu3g2073 867 Pfam Damage-control phosphatase ARMT1-like domain 575 851 IPR002791 -
Pvu3g2073 867 SUPERFAMILY AF1104-like 482 865 IPR036075 -
Pvu3g2073 867 Gene3D - 270 380 - -
Pvu3g2073 867 SUPERFAMILY Actin-like ATPase domain 159 391 IPR043129 -
Pvu3g2073 867 PANTHER PANTOTHENATE KINASE 2 6 789 - -
Pvu3g2073 867 PIRSF PanK_long 1 867 IPR015844 GO:0004594|GO:0015937
Pvu3g2073 867 Gene3D - 503 588 IPR035073 -
Pvu3g2073 867 Gene3D Uncharacterised protein PF01937, DUF89, domain 3 668 865 - -
Pvu3g2073 867 TIGRFAM panK_eukar: pantothenate kinase 49 390 IPR004567 GO:0004594|GO:0005524|GO:0015937
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2073 Pvu-Chr3 41414921 41430101 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2073 K24265 K09680 gmx:100783082 1574.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2073 3 41414921 41430101 Pvu9g1840 9 26060303 26077217 ECH
Pvu3g2073 3 41414921 41430101 Pvu3g2073 3 41414921 41430101 ECH
Pvu3g2073 3 41414921 41430101 Pvu9g1840 9 26060303 26077217 PCT