Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2068 ATGGCCACCCAATCGCCGCCGCCTCCTCCCACTCCCACTGCCACGGACGAAAACCAAGGTTCTGAAATTGTGCAACCAGCAAATATGAATCTGCAAAACACCAGAGAAGAAGAGCCTGCTAAACCGAGTTCAACTCCCTCAGTATTTGTAAACTCACAACCATTGAGGGAAGATCAAGTACAGAATGCTGTGAAATTTCTGTCTCACCCAAAAGTTAAAGGTTCACCTGTCCTCTATAGGCGATCATTTTTAGAGAAGAAGGGCCTTACAAAGGAGGAGATTGATGAAGCCTTCCGGCGAGTGCCAGATTCAGCTCCAACTGTGCAGACAGGTGGTGTAAATCAAGATGGGCAATTGAAATCATCATCAAACAATCAGCAACAAACTCAGCAAAAAACTTTGCAGCCGATTTCACCTGCTTCTACTGGTGTTAATACTTCATCAGGAACATTACCACACTCCAGGTTTCACTGGTCCCATGCCCTTATTGCAGTTGGATTACTGGCTGCTTCAGGTGCTGGAACAGCTATAATAATTAAGAAATCTTTTCTCCCCCGGTTAAAATCTTGGATACGTAAAGTTGTCCTTGACAATGATGATGAACAACTAAAGAAAACTGATGACAAACCAACATTGATGGAAGAGGCTGCACAAGCTGCAAAATCAGCTGCAGCTGCAGCTGCCGAAGTGGCAAAAGTGAGCCAAGAAATTCTGGCTTCAAAAGGTGAAGAGAGGAGATACTTTGTGGAAGTTGTGAGCCTTTTAGACGTGCAAGTACAAGAAATGAAGTCAATGACAAATGCTATAAGAAGATTGGAAGGGCAAGAAGATCTCCGAATCAGTCAAACAAGTTCAAAGCAACTGATTGTGAATGGCAAAGCCGACCATGACTTGCGTTCAGTGAGATCTTCATCTCCACCTGCATCTGTTGAACCATCAAGTGGTCTTCATCCAAAGTCATATATGGAGATAATGGCCATGGTCCAAAGAGGAGAGAAGCCTTCTAATATTAGAGATATCAGTGATTTACCCCCCAACCCTAGTCAACAACCATCAAATCCACTCTTAGTGCCTAGATCCAAGCCTTGGGAGGTTGGTCAGGTGCAAAGCACGTCAACTCAGATGCTTCAATCTCAAGTAAATGGTGAAGACTTGAATACCAAGACCCAGGATACGTCTCTAGTAAATGGGGATGATCCATTGCCCTGGTGGCAGAGGAAAAATGTCAGAATCACAGAGATTGACAATGAAAATGAGTCTAACGGAGTACCTTTTGCTGCTGCATCCAGTCAGCAGCCAGTTCAACGTGTATGGGTTCCTCCTCAACCTCCACCCATAGCTATGGCTGGGGCTGCAGAAGCAATCAGACGCCCAAAGCAAGTGGCCCAAAAGGAACAGATGTCAGATAATCAGTCAGTGGCTCATTCTTCTGACAGCTCTGATGACGTGCAAAGGGTCTCAAAGCTATTGGAATCTGAAGGTGCAGTCGAGAGCAGCAGTGTCAGCTCAGTTCCCAGATCAAGTGAGATACAAGAGGAGAATGAAGTCAAATATGATGAGAAATGA 1566 0.4489 MATQSPPPPPTPTATDENQGSEIVQPANMNLQNTREEEPAKPSSTPSVFVNSQPLREDQVQNAVKFLSHPKVKGSPVLYRRSFLEKKGLTKEEIDEAFRRVPDSAPTVQTGGVNQDGQLKSSSNNQQQTQQKTLQPISPASTGVNTSSGTLPHSRFHWSHALIAVGLLAASGAGTAIIIKKSFLPRLKSWIRKVVLDNDDEQLKKTDDKPTLMEEAAQAAKSAAAAAAEVAKVSQEILASKGEERRYFVEVVSLLDVQVQEMKSMTNAIRRLEGQEDLRISQTSSKQLIVNGKADHDLRSVRSSSPPASVEPSSGLHPKSYMEIMAMVQRGEKPSNIRDISDLPPNPSQQPSNPLLVPRSKPWEVGQVQSTSTQMLQSQVNGEDLNTKTQDTSLVNGDDPLPWWQRKNVRITEIDNENESNGVPFAAASSQQPVQRVWVPPQPPPIAMAGAAEAIRRPKQVAQKEQMSDNQSVAHSSDSSDDVQRVSKLLESEGAVESSSVSSVPRSSEIQEENEVKYDEK* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2068 521 MobiDBLite consensus disorder prediction 291 318 - -
Pvu3g2068 521 MobiDBLite consensus disorder prediction 335 357 - -
Pvu3g2068 521 MobiDBLite consensus disorder prediction 440 521 - -
Pvu3g2068 521 Coils Coil 255 275 - -
Pvu3g2068 521 Gene3D - 48 110 IPR036388 -
Pvu3g2068 521 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX14-LIKE 12 514 - -
Pvu3g2068 521 MobiDBLite consensus disorder prediction 493 509 - -
Pvu3g2068 521 Pfam Pex14 N-terminal domain 56 100 IPR006785 -
Pvu3g2068 521 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX14 12 514 IPR025655 GO:0005515|GO:0005778|GO:0016560
Pvu3g2068 521 MobiDBLite consensus disorder prediction 15 54 - -
Pvu3g2068 521 MobiDBLite consensus disorder prediction 97 149 - -
Pvu3g2068 521 Pfam Family of unknown function (DUF5572) 317 365 - -
Pvu3g2068 521 MobiDBLite consensus disorder prediction 464 480 - -
Pvu3g2068 521 MobiDBLite consensus disorder prediction 1 54 - -
Pvu3g2068 521 MobiDBLite consensus disorder prediction 107 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2068 Pvu-Chr3 41344917 41359097 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2068 K13343 - gmx:100784152 716.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2068 3 41344917 41359097 Pvu3g2068 3 41344917 41359097 ECH
Pvu3g2068 3 41344917 41359097 Pvu9g1846 9 26228835 26232634 PCT