Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2052 ATGCGATCCTCAACTGTTCGATGCTTCATCATCTTCACCCTGCTACTTCTCCTTTTGCAGGGTCACGCAACAACCCACAAACTTCTCTCTTCTCCTTTTTCAACCGCTCTCGAAACCCTCCAGAAACAACTCGGGTACACCTTCAAGAGCACTGATCTTCTCCGTCGAGCCATGACTCACGCCTCCTTCTCCGAAGAAAACAACAAAGCTTTCGCCATTCTTGGCGCCACCGTCATCGAAACCTCGGTCTCTTTCCACTTACTCTCCAAAGACGTTGATATTTCTCCCAAAGAGCTGAACCATCGATTGTCCCAAATCACCAACGTCGACTCTTCCTGCGCCGTCGACGGAACTCGATTAGGGTTGCACAAGATCGTTCGCGTCTCGCCCAAGACCAATTCCTCCGCCCCTGCTGTCGTTTGCGGCGCGTTCCGAGCAATCTTCGCTGCCATTTCTATTGACAGCGGCATGCCCGATAATGCAGGTAACGTCTTCTGGAACCTTCATGGCGGTGAGCTAGGATCTGCCGTGGCTATTTGA 540 0.5185 MRSSTVRCFIIFTLLLLLLQGHATTHKLLSSPFSTALETLQKQLGYTFKSTDLLRRAMTHASFSEENNKAFAILGATVIETSVSFHLLSKDVDISPKELNHRLSQITNVDSSCAVDGTRLGLHKIVRVSPKTNSSAPAVVCGAFRAIFAAISIDSGMPDNAGNVFWNLHGGELGSAVAI* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2052 179 PANTHER RIBONUCLEASE 3 31 157 - -
Pvu3g2052 179 Pfam Ribonuclease-III-like 52 157 IPR000999 GO:0004525|GO:0006396
Pvu3g2052 179 ProSiteProfiles Ribonuclease III family domain profile. 37 156 IPR000999 GO:0004525|GO:0006396
Pvu3g2052 179 Gene3D Ribonuclease III domain 35 174 IPR036389 GO:0004525|GO:0006396
Pvu3g2052 179 CDD RIBOc 52 159 IPR000999 GO:0004525|GO:0006396
Pvu3g2052 179 SUPERFAMILY RNase III domain-like 31 158 IPR036389 GO:0004525|GO:0006396
Pvu3g2052 179 PANTHER RIBONUCLEASE III 31 157 IPR011907 GO:0003723|GO:0004525|GO:0006364
Pvu3g2052 179 SMART riboneu5 52 178 IPR000999 GO:0004525|GO:0006396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2052 - - gmx:100527745 274.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2052 3 41159439 41160395 Pvu3g2052 3 41159439 41160395 ECH