Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2045 ATGGGACCTGTCAAACGAAAGAGAGGACGCAAACCCAAAACCTCCGCCCCCGAAACCCTAGACATCCCCACCCCTTCCCCCGTCACCGATACCGCCGCTGCCGCTCCTAACTCCGCTGCCACCACTGCCTCAATGGAGGACGTCTTTGCCGTCGGCAACGTCGAGCTCATCGATAACACCGCCTCTACCCACGTTCGCCGCCGTGGCCGCCCCAAGAAGCTCCCCACCCACTCAGACAAGCCTCTCTCTCGTCGCCTCGCCCGCCCCCTCGACAACGGCGTTGGAGACTACTCGGTTCCCGGCGACGCCGGGGTGTCCGCCTTGGTGGCGATGGAGGCGGACACGGAGTGGGAGGCGCGTGTGATGCCGTCGATGGACTCCGTGGTGAAGGTGTTTTGTGTCCACACGGAACCGAATTTCTCGCTGCCATGGCAGCGGAAGAGACAGTACAGCTCGAGTAGTAGCGGGTTTGTGATTGGCGGGAGAAGGGTTCTGACGAATGCGCATTCGGTGGAACACTACACACAGGTCAAGCTCAAGAAACGTGGCTCTGATACCAAGTACTTGGCCACTGTGCTTGCCATTGGAACCGAATGTGATATTGCCATGCTTACAGTGGATGATGATGAGTTCTGGCAAGGGATGTCACCTGTAGAGTTTGGGGAGTTGCCCGCACTTCAAGATGCGGTTACTGTTGTGGGCTACCCAATTGGTGGAGACACTATCTCTGTGACCAGTGGTGTTGTATCACGCATAGAGATTCTATCTTATGTTCATGGTTCTACAGAACTTTTAGGTTTACAGATAGATGCTGCTATAAATTCTGGCAATTCAGGTGGACCTGCATTTAATGATAAAGGAAACTGTGTGGGAATTGCGTTTCAGTCCCTTAAGCACGAAGATGCGGAGAATATAGGTTATGTCATTCCAACACCAGTTATCATGCATTTCATCCGGGATTATGAGAAGAACGGAGGCTACACTGGGTTCCCTATTCTAGGGGTTGAGTGGCAGAAGATGGAAAATCCTGATTTGCGAATGGCAACAGGCATGAGACCTGACCAAAAAGGTGTGCGCATTAGAAGAATTGATCCTACTGCTCCAGAATCTAAGGTTTTGGAGCCATCAGATGTTATCCTTAGTTTTGATGGGATTGATATCGCCAATGATGGAACAGTTCCATTTCGTCATGGAGAGCGCATTGGTTTCAGTTATCTCATCTCTCAGAAATATACTGGGGATAATGCAGCAATAAAAGTACTGCGAAATCCAGACATTTTAAAATTTGACATTAAACTCGATAGTCACAGAAGGCTTATTCCATCACATAGCAAGGGCAAGCCTCCCTCTTATTATATAATTGCTGGATTTGTTTTTACAACTGTTTCAGTTCCATATCTTCGTTCGGAGTATGGAAAGGATTATGAATATGAAGCTCCAGTCAAGCTTTTGGATAAATTGCTGCATTCATTGCCACAATCCCCAGATGAACAACTTGTTGTGGTCTCTCAGGTGCTTGTGGCTGATATCAACATTGGATATGAAGATATTGTTAACATCCAGGTCCTTGCTTTCAATGGTAAACCAGTGAAAAACCTGAAGAGCTTGGCCACTATGGTAGAGAGCTGCAATGATGAATATCTAAAATTTGATCTAGATTATGATCAGATAGTGGTGCTTCGCTCAAAGACTGCAAAAGCAACTACTCTTGATATTCTTGCAACACACTGTATTCCATCAGCGATGTCTGATGATCTTAAGTTATGA 1767 0.4776 MGPVKRKRGRKPKTSAPETLDIPTPSPVTDTAAAAPNSAATTASMEDVFAVGNVELIDNTASTHVRRRGRPKKLPTHSDKPLSRRLARPLDNGVGDYSVPGDAGVSALVAMEADTEWEARVMPSMDSVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFVIGGRRVLTNAHSVEHYTQVKLKKRGSDTKYLATVLAIGTECDIAMLTVDDDEFWQGMSPVEFGELPALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGNCVGIAFQSLKHEDAENIGYVIPTPVIMHFIRDYEKNGGYTGFPILGVEWQKMENPDLRMATGMRPDQKGVRIRRIDPTAPESKVLEPSDVILSFDGIDIANDGTVPFRHGERIGFSYLISQKYTGDNAAIKVLRNPDILKFDIKLDSHRRLIPSHSKGKPPSYYIIAGFVFTTVSVPYLRSEYGKDYEYEAPVKLLDKLLHSLPQSPDEQLVVVSQVLVADINIGYEDIVNIQVLAFNGKPVKNLKSLATMVESCNDEYLKFDLDYDQIVVLRSKTAKATTLDILATHCIPSAMSDDLKL* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2045 588 CDD PDZ_serine_protease 331 423 - -
Pvu3g2045 588 MobiDBLite consensus disorder prediction 61 95 - -
Pvu3g2045 588 Gene3D - 212 323 IPR043504 -
Pvu3g2045 588 MobiDBLite consensus disorder prediction 19 39 - -
Pvu3g2045 588 Gene3D - 106 211 IPR043504 -
Pvu3g2045 588 SUPERFAMILY Trypsin-like serine proteases 125 325 IPR009003 -
Pvu3g2045 588 Pfam PDZ domain 440 585 IPR041517 -
Pvu3g2045 588 PRINTS HtrA/DegQ protease family signature 156 168 IPR001940 GO:0004252|GO:0006508
Pvu3g2045 588 PRINTS HtrA/DegQ protease family signature 184 204 IPR001940 GO:0004252|GO:0006508
Pvu3g2045 588 PRINTS HtrA/DegQ protease family signature 226 250 IPR001940 GO:0004252|GO:0006508
Pvu3g2045 588 PRINTS HtrA/DegQ protease family signature 263 280 IPR001940 GO:0004252|GO:0006508
Pvu3g2045 588 PRINTS HtrA/DegQ protease family signature 372 384 IPR001940 GO:0004252|GO:0006508
Pvu3g2045 588 Pfam Trypsin-like peptidase domain 155 292 - -
Pvu3g2045 588 SUPERFAMILY PDZ domain-like 356 438 IPR036034 GO:0005515
Pvu3g2045 588 Gene3D - 439 588 IPR046449 -
Pvu3g2045 588 MobiDBLite consensus disorder prediction 1 39 - -
Pvu3g2045 588 Gene3D - 326 438 IPR036034 GO:0005515
Pvu3g2045 588 PANTHER PROTEASE DO-LIKE 9 5 587 - -
Pvu3g2045 588 PANTHER - 5 587 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2045 Pvu-Chr3 41089112 41093784 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2045 K25897 - gmx:100817187 1019.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2045 3 41089112 41093784 Pvu3g2045 3 41089112 41093784 ECH