Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2009 ATGAAGACGACGAAGGGTGGCAAGGTCATGAACCCCACCGATGCTTACCGGAAGGAGCTTCGTAAGAAAGAATTGAAGAGGAATAAGAAGGAAAGAAAAAAAGTGAGGGAGGTGGGGATTTTGAAGAAGGATCCTGATCAGTTGAAGAAGCAGATTGAGAACTTGGAGATGATGAAGGCTGATGGTGCTTTGGATAAAGCAAGAAAGCACAAGAAGAGACAGCTACAAGACACACTTAATCTTGTTCTAAAGAAGAGGAAGGAATATGAAGAGAAAATGCGGGAGAAGGGTGAGGCCCCAGTCATGTTCAGTCATTTGGGGCCTCCTCGAAGGAGAACAACTGCGGAAGAAGAAGAGAGGGTTAAACACCCAAAGCCCGAGGATTCTGTTTATTACCATCCTACGTTAAACCCCACTGGGGCTCCACCACCAGGGAAACCTCCTATGTTTAAATCATCTATAGGACCAAGAATTCCTTTGTCTGGTGCTTCATCTAGTGGTGCAGCATCATCCATGGAAATGGAGACAGAGGATGATGTATTAGCTGTACCTCCACCTCCCCCACCGCCTCCATTGCCTGATGGTAGCAATGCAAGTTCAGCAGATGGCACTGTTTTACCTGCATCTTTACCATTGCCTCCTCCCCCTCCCATGCCTCCAAAGCCTGCTAGTGCTGTGTCCACATCATTACCACCACCCCCTTTGCCGCCTCCACCTCCTGGTCCCCCACCTAAAGATCAAGTTGCAAATCGTCCTATTCCGCCTCCACCTCCTCCCTTACAACAGTCTCAACCGCCTCCACCTGGCACCAGTGGAGGTGAAGGGAGAAATCAGTCTGCATTAACAGATGATTCACCTTCCAAGGATCCTAGTCAGGTGCAGCTCCCTCCACCTCCTCCACCTAATCAGGTGCCACCAAAAATTGGTATGGTTCAGTCTGATGGTGCCGTGCTTTCTACGGAGAGTAAGAATTCACTTTCAAACCAGGAAATTCCAAAAATGGTTGCCGGGCATCCTCCTCCAAGGCAACAACCTTCTGTTCCAGGACCCAATTTAATCCCAAGTTTACAGCCTGATGTATTACCCCCAGGAATATCCCGTTTCCCACCACCCCCACCACCACCTGACATGAGGCCTCCTTTACCTGTGGCAGGACTCCCTGGTCAGGCACCACCTCCTGGAATGATGCTTCCCATAATTCCTATGGCACCACCATATGGCCCTCCACCTGGTCCTCCTCCAATGATGAGGCCTCCACTTCCACCTGGTCCTCCTCCAAACTTCCAGGAAGAGGATCATATGGCAATTAGGCCGCCTCCCCCTCCTCCGAAACCATCATATGTTAAATCTGCTGCTTCTACTGTTGTTAAAAGGCCATTAGCGCAACACACTCCAGAACTCACTGCTATGGTTCCTGCATCTGTGCGAGTGAGAAGAGAAACTGCAATGAGTAAAACAAAACCGAAACCGGCAGTGTCAACCTCTAGGACTGTCTCTGGGACATCAGGGCCAACTATTGTAAAGTCAGAGGCGGTGAGCTCGTCATCAGCTCCAAAAGCACCAAGCATTGATGACTCATACACGGCTTTCTTGGAGGACATGAAAGCCCTTGGTGCACTTGATGGTTGA 1629 0.4972 MKTTKGGKVMNPTDAYRKELRKKELKRNKKERKKVREVGILKKDPDQLKKQIENLEMMKADGALDKARKHKKRQLQDTLNLVLKKRKEYEEKMREKGEAPVMFSHLGPPRRRTTAEEEERVKHPKPEDSVYYHPTLNPTGAPPPGKPPMFKSSIGPRIPLSGASSSGAASSMEMETEDDVLAVPPPPPPPPLPDGSNASSADGTVLPASLPLPPPPPMPPKPASAVSTSLPPPPLPPPPPGPPPKDQVANRPIPPPPPPLQQSQPPPPGTSGGEGRNQSALTDDSPSKDPSQVQLPPPPPPNQVPPKIGMVQSDGAVLSTESKNSLSNQEIPKMVAGHPPPRQQPSVPGPNLIPSLQPDVLPPGISRFPPPPPPPDMRPPLPVAGLPGQAPPPGMMLPIIPMAPPYGPPPGPPPMMRPPLPPGPPPNFQEEDHMAIRPPPPPPKPSYVKSAASTVVKRPLAQHTPELTAMVPASVRVRRETAMSKTKPKPAVSTSRTVSGTSGPTIVKSEAVSSSSAPKAPSIDDSYTAFLEDMKALGALDG* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2009 542 MobiDBLite consensus disorder prediction 479 525 - -
Pvu3g2009 542 Coils Coil 13 33 - -
Pvu3g2009 542 MobiDBLite consensus disorder prediction 291 306 - -
Pvu3g2009 542 Coils Coil 72 92 - -
Pvu3g2009 542 MobiDBLite consensus disorder prediction 1 33 - -
Pvu3g2009 542 MobiDBLite consensus disorder prediction 338 428 - -
Pvu3g2009 542 MobiDBLite consensus disorder prediction 487 522 - -
Pvu3g2009 542 PANTHER WW DOMAIN-BINDING PROTEIN 11 2 541 IPR019007 GO:0006396
Pvu3g2009 542 Pfam mRNA biogenesis factor 126 186 - -
Pvu3g2009 542 Pfam WW domain binding protein 11 7 83 IPR019007 GO:0006396
Pvu3g2009 542 MobiDBLite consensus disorder prediction 315 331 - -
Pvu3g2009 542 PANTHER WW DOMAIN-BINDING PROTEIN 11 2 541 - -
Pvu3g2009 542 MobiDBLite consensus disorder prediction 110 129 - -
Pvu3g2009 542 MobiDBLite consensus disorder prediction 208 266 - -
Pvu3g2009 542 MobiDBLite consensus disorder prediction 158 172 - -
Pvu3g2009 542 MobiDBLite consensus disorder prediction 92 464 - -
Pvu3g2009 542 MobiDBLite consensus disorder prediction 267 290 - -
Pvu3g2009 542 MobiDBLite consensus disorder prediction 181 195 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2009 - - gmx:100792892 689.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2009 3 40706591 40712243 Pvu3g2009 3 40706591 40712243 ECH