Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1989 ATGACGACGCCGTTTCAGCAACCACCCCAAATCGTACGGAGACTGGTCGTAGAAGTCATCGACGCGCGCAATCTTCTCCCCAAAGATGGCCAAGGTAGCTCCAGCCCTTACGTGGTGGCTGACTTCGACGGCCAGAGGAAGCGAACCACCACCCGCTTCAAGGAGCTCAACCCGGTCTGGAACGAGCCGCTCGAGTTCATTGTGTCCGACCCGGATAATATGGAGTTCGAGGAGCTCGAAGTTGAGGTTTACAACGACAGGAAGTTCGGCAACGGTGGCGGACGCAAGAACCACTTCCTCGGGAGGGTTAAACTGTATGGAACTCAGTTTTCCAGAAGAGGTGAAGAAGCTCTTGTTTACTACACACTGGAGAAGAGGAGCGTCTTCAGTTGGATAAGGGGAGAAATTGGCCTCAGGATTTATTACTACGATGAAATGCTTACTGAAGAGGAGAGACAGCCGCCGCAGCAGCCGGAGGAGCAGGGTGAGAGACCGGAGCAAGAGCGGAACAGGCCGCCGCAGGGAATGGTGGTTGTTGAGGAGGGACGGGTTTTCGAGGCGCCTGGACCGATGGAGCAATGCGTGCCTCTTCCTACTGGTCTTCCTCATTCGCCGCGTGTTGTGGTTGTGGAGGAATCGCCGCCGCCGGTGGTTCATATTCCACAGGAGCCGCCTTTGTCAGAAATGTTTGAGCCCCCGGTGTCGGAAATGCAGTTTCATCCGGAGATGAGGAAAATGCAGGCCAACAGAGGCGAGAGGGTGAAGATTTTGAAGCGGCCGAACGGGGACTACTCACCTAAAGATATCTCTGCAAAGAAATCGGGTAATGAGTCTGAGAGGGTTCATCCGTTCGATCTGGTGGAGCCGATGCAGTATCTGTTTGTCAAAATCGTGAAAGCTCGCGGGGTTGCCCCTCCCAGTGAAGCCCCGTTCGTGAAGGTTCGGACGTCGAGCCACTACATGAGATCGAAGCCAGCGAGTTTTCGGCCCAACGATCCCCCTGATTCGCCGGAGTGGAACCAGGTGTTTGCGCTGGGTTACAATAAGACCGATGCTAACAGCGCCACTCTGGAGATTTCCGTCTGGGATACCTCGACAGAGAATTTTCTAGGCGGTGTTTGCTTCGACCTTTCTGATGTTCCAGTGAGAGATCCTCCCGACAGTCCCTTGGCACCGCAATGGTACCGTCTTGAAGGAGGAACCGCCGAACAGAATCCAGGTAGAGTTTCCGGCGACATTCAGCTATCTGTTTGGATTGGCACGCAATCCGACGACGCGTTCCCAGAAGCGTGGATCTCAGACGCACCGTATGTTGCACATACTCGATCTAAGGTTTACCAATCGCCAAAGCTCTGGTACCTTCGCGTGACTGTAGTGGAAGCACAAGACCTGAATATTGCACCGAATCTGCCTCCACTGACAGCGCCGGAAGTGAGGGTGAAGGTGCAACTTGGGTTCCAATCGCAGCGAACAAGGCGAGGATCAATGAACCACAGAAGCTTATCGTTCCACTGGAACGAGGACCTTCTCTTCGTGGCCGGGGAGCCTCTGGAAGATTCTGTCATCATTCTGATAGAAGATCGTACTACCAAGGAAGCAGCTCTCCTAGGTCACATCGTGGTTCCGCTGAGCTCCATCGAGCAACGAATCGACGAGCGCCACGTTGCGGCGAAATGGTTCCCGTTAGAAGGTGGGCCATACTGCGGGCGAGTGTTCCTGCGTCTCTGCCTAGAGGGTGGCTATCACGTGCTGGACGAGGCGGCGCACGTGTGCAGCGATTTCCGTCCCACGGCGAAGCAGTTATGGAAACCGGCGGTGGGAATTCTAGAACTGGGGATTCTGGGCGCTCGCGGGCTCCTACCGATGAAATCAAAAGGCGGTGGAAAAGGGTCCACCGATGCTTACTGTGTGGCCAAGTATGGGAAAAAGTGGGTCCGAACCCGCACCGTAACCGACAGCTTTGATCCACGCTGGAACGAGCAGTACACGTGGCAAGTTTACGACCCCTGCACTGTCCTCACTGTTGGAGTGTTCGACAACTGGCGCATGTTTGCTGACGTGCCAGAAGACAGGCCCGACTGCCGTATCGGCAAGGTTCGGATACGTGTCTCGACGCTTGAGAGCAACAGAGTGTACACCAATTCCTACCCCCTCCTAGTCCTCACGCGAACCGGGTTGAAGAAAATGGGGGAAATCGAGTTGGCGGTTCGTTTCGCCTGCCCCTCATTGTTACCCGACACGTGTGCAGTTTACGGCCAGCCACTGCTTCCACGAATGCACTATCTCCGGCCGCTCGGGGTGGCGCAGCAGGAGGCGTTGCGTGGGGCCGCGACAAAGATGGTGGCGCAGTGGCTGGCGAGGTCAGAGCCAGCGCTGGGGCACGAGGTAGTTCGGTACATGTTGGATGCAGACTCGCACGTGTGGAGCATGAGGAAGAGCAAGGCGAATTGGTTCAGAATCGTGGCGGTTTTGGCTTGGGCCGTTGGTTTGGCGAAATGGTTGGATGATATAAGAAGATGGAAGAACCCTGTGACCACGGTGCTGCTCCACATGCTTTATTTAGTGCTTGTTTGGTATCCAGATTTGATTGTCCCCACAGGGTTCTTATACGTGGTCTTAATTGGGATATGGTATTACCGGTTCAGGCCAAAAATACCGGCTGGAATGGATACCCGGTTGTCTCAGGCGGAAGCGGTTGACCCGGATGAGTTGGACGAGGAATTTGACACCATGCCAAGTTCGAAACCACCGGACATAATCCGAATGCGCTATGATAGGTTAAGAATGCTAGCAGCTCGAGTCCAAACGGTGTTGGGTGATTTTGCAACCCAGGGAGAGAGGCTTCAAGCCTTGGTTAGTTGGAGAGATCCCAGGGCTACCAAGTTGTTCATTGGAGTATGCCTTGCTATAACTGTCACACTCTATGCAATGCCACCAAAAATGGTGGCCGTCGCCCTAGGCTTTTATTACCTCCGCCACCCCATGTTCCGGAACCCAATGCCCTCCGCCACCTTGAACTTTTTCCGGCGACTTCCTAGCCTCTCTGATCGCTTGATGTAG 3060 0.5467 MTTPFQQPPQIVRRLVVEVIDARNLLPKDGQGSSSPYVVADFDGQRKRTTTRFKELNPVWNEPLEFIVSDPDNMEFEELEVEVYNDRKFGNGGGRKNHFLGRVKLYGTQFSRRGEEALVYYTLEKRSVFSWIRGEIGLRIYYYDEMLTEEERQPPQQPEEQGERPEQERNRPPQGMVVVEEGRVFEAPGPMEQCVPLPTGLPHSPRVVVVEESPPPVVHIPQEPPLSEMFEPPVSEMQFHPEMRKMQANRGERVKILKRPNGDYSPKDISAKKSGNESERVHPFDLVEPMQYLFVKIVKARGVAPPSEAPFVKVRTSSHYMRSKPASFRPNDPPDSPEWNQVFALGYNKTDANSATLEISVWDTSTENFLGGVCFDLSDVPVRDPPDSPLAPQWYRLEGGTAEQNPGRVSGDIQLSVWIGTQSDDAFPEAWISDAPYVAHTRSKVYQSPKLWYLRVTVVEAQDLNIAPNLPPLTAPEVRVKVQLGFQSQRTRRGSMNHRSLSFHWNEDLLFVAGEPLEDSVIILIEDRTTKEAALLGHIVVPLSSIEQRIDERHVAAKWFPLEGGPYCGRVFLRLCLEGGYHVLDEAAHVCSDFRPTAKQLWKPAVGILELGILGARGLLPMKSKGGGKGSTDAYCVAKYGKKWVRTRTVTDSFDPRWNEQYTWQVYDPCTVLTVGVFDNWRMFADVPEDRPDCRIGKVRIRVSTLESNRVYTNSYPLLVLTRTGLKKMGEIELAVRFACPSLLPDTCAVYGQPLLPRMHYLRPLGVAQQEALRGAATKMVAQWLARSEPALGHEVVRYMLDADSHVWSMRKSKANWFRIVAVLAWAVGLAKWLDDIRRWKNPVTTVLLHMLYLVLVWYPDLIVPTGFLYVVLIGIWYYRFRPKIPAGMDTRLSQAEAVDPDELDEEFDTMPSSKPPDIIRMRYDRLRMLAARVQTVLGDFATQGERLQALVSWRDPRATKLFIGVCLAITVTLYAMPPKMVAVALGFYYLRHPMFRNPMPSATLNFFRRLPSLSDRLM* 1020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1989 1019 CDD C2D_MCTP_PRT_plant 608 735 - -
Pvu3g1989 1019 ProSiteProfiles C2 domain profile. 1 120 IPR000008 -
Pvu3g1989 1019 PANTHER PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 11 1019 - -
Pvu3g1989 1019 Gene3D C2 domain 605 741 IPR035892 -
Pvu3g1989 1019 Pfam Plant phosphoribosyltransferase C-terminal 864 1019 IPR013583 -
Pvu3g1989 1019 CDD C2C_MCTP_PRT_plant 453 596 - -
Pvu3g1989 1019 ProSiteProfiles C2 domain profile. 590 716 IPR000008 -
Pvu3g1989 1019 PANTHER BNAA10G16860D PROTEIN 11 1019 - -
Pvu3g1989 1019 Gene3D C2 domain 12 174 IPR035892 -
Pvu3g1989 1019 Gene3D C2 domain 438 577 IPR035892 -
Pvu3g1989 1019 Pfam C2 domain 452 562 IPR000008 -
Pvu3g1989 1019 Pfam C2 domain 14 106 IPR000008 -
Pvu3g1989 1019 Pfam C2 domain 607 718 IPR000008 -
Pvu3g1989 1019 Pfam C2 domain 292 395 IPR000008 -
Pvu3g1989 1019 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 452 598 IPR035892 -
Pvu3g1989 1019 CDD C2A_MCTP_PRT_plant 14 144 - -
Pvu3g1989 1019 SMART C2_3c 453 555 IPR000008 -
Pvu3g1989 1019 SMART C2_3c 14 119 IPR000008 -
Pvu3g1989 1019 SMART C2_3c 292 389 IPR000008 -
Pvu3g1989 1019 SMART C2_3c 608 715 IPR000008 -
Pvu3g1989 1019 MobiDBLite consensus disorder prediction 257 280 - -
Pvu3g1989 1019 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 14 157 IPR035892 -
Pvu3g1989 1019 ProSiteProfiles C2 domain profile. 273 395 IPR000008 -
Pvu3g1989 1019 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 292 437 IPR035892 -
Pvu3g1989 1019 CDD C2B_MCTP_PRT_plant 292 421 - -
Pvu3g1989 1019 ProSiteProfiles C2 domain profile. 432 560 IPR000008 -
Pvu3g1989 1019 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 607 759 IPR035892 -
Pvu3g1989 1019 Gene3D C2 domain 284 419 IPR035892 -
Pvu3g1989 1019 MobiDBLite consensus disorder prediction 149 170 - -
Pvu3g1989 1019 MobiDBLite consensus disorder prediction 149 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1989 Pvu-Chr3 40498367 40502814 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1989 2 1019 Lipid Metabolism Gene Families AT1G74720 70.929 0.0 1553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1989 - - gmx:100783882 1901.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1989 3 40498367 40502814 Pvu3g1989 3 40498367 40502814 ECH