Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1979 ATGACTAAGATAGTGTTGTTGTTATGTTTTCTGTTGGGGCTTCTGCTCCTTGCTCAGGCACGTGACCATCATAGGAAAATTGAGTTTTATGAACTGGAGAGAGGAGATTTCAAGCTGAATTTGACAAATTATGGTGCTACAATAATCTCTCTTACAACCCCTGATAAACACGGGAAACCAGCTGATATTGTTCTTGGATATGATTCCATTGATTCTTACGAGAATGACAAAAGTTACTTCGGTGCCCTTATTGGACGAGTGGCAAATAGGATTGCAGGAGCTAAATTCACTTTGGATGGCAAAACCTACCAGTTACCCGCAAATGATCACGGGAACACACTTCATGGTGGCTCAAGAGGTTTCAGTGACGTTGTATGGTCGGTGGAATCTCACAAGAAACACAGTCATATAACATTTACCTACAACAGTTATGAAAATGAACAAGGCTTTCCTGGAAAACTAAAGGTCAAAGTAACTTACATGCTGATTGGAGCACACGAACTGGCTGTGAAAATGATTGCCAAGCCAGTGGACAAAGCCACACCAGTGAATCTTGCGCAGCATACTTACTGGAACCTTGGGGGCCACAACAGTGGTGACATTCTTTCTCACATTGTTCAGATCTTTGGTTCACACATCACAGCAGTGGACAAGCTTCTCATTCCCACTGGCGAAATCATATCCGTAAAGGGCACACCATATGATTTCCTTGAACCAAAAAAAGTTGCAACCTACATTCACGAGCTTCCAGATCTATATGATATGAACTATGTCCTGGACAAAAGTTTCCAAAATCACTTAAGCAAGGTTGCGGTAGTTAGAGACCCTGTCTCTGGGAGGAAAATGGAGCTGTGGTCAAACCAACTTGGTGTGCAGTTCTATACTAGTGGCCAGTTGAATGCTACCAAAGGCAAGGATGGGGCTATATACCACAAGTTTGCTGCCATTGCCTTGGAGACACAGGGTTTCCCAGATTCAGTGAATCACCCTTACTTTCCAACACAGATTGTGAAGCCTGGGGAGACTTACGAGCACATCATGGTTTACAGATTCACAGCTCACTAA 1065 0.4329 MTKIVLLLCFLLGLLLLAQARDHHRKIEFYELERGDFKLNLTNYGATIISLTTPDKHGKPADIVLGYDSIDSYENDKSYFGALIGRVANRIAGAKFTLDGKTYQLPANDHGNTLHGGSRGFSDVVWSVESHKKHSHITFTYNSYENEQGFPGKLKVKVTYMLIGAHELAVKMIAKPVDKATPVNLAQHTYWNLGGHNSGDILSHIVQIFGSHITAVDKLLIPTGEIISVKGTPYDFLEPKKVATYIHELPDLYDMNYVLDKSFQNHLSKVAVVRDPVSGRKMELWSNQLGVQFYTSGQLNATKGKDGAIYHKFAAIALETQGFPDSVNHPYFPTQIVKPGETYEHIMVYRFTAH* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1979 354 PANTHER ALDOSE 1-EPIMERASE 3 354 - -
Pvu3g1979 354 PIRSF GALM 18 354 IPR015443 GO:0016853|GO:0019318
Pvu3g1979 354 Pfam Aldose 1-epimerase 30 350 IPR008183 GO:0005975|GO:0016853
Pvu3g1979 354 PANTHER ALDOSE-1-EPIMERASE 3 354 - -
Pvu3g1979 354 CDD galactose_mutarotase_like 30 351 - -
Pvu3g1979 354 SUPERFAMILY Galactose mutarotase-like 23 351 IPR011013 GO:0003824|GO:0005975|GO:0030246
Pvu3g1979 354 Gene3D - 18 353 IPR014718 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1979 Pvu-Chr3 40387758 40389694 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1979 11 354 Miscellaneous Gene Families AT3G47800 58.721 1.35e-153 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1979 K01785 - gmx:100806956 590.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1979 3 40387758 40389694 Pvu3g1979 3 40387758 40389694 ECH