Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1971 ATGGAATCGGCGGGTGAGTGGCTGGAGAAGGCGCTGGTCGAGTTGTGCTCCAAAATTGAAACTGGTTTGGGTTTAGGTTTGGATCAAGAGATCATCAAAGGCCTTGTTTCTTACTGCGACCTTGCTCAGCCACCAGACGCCAAAGAGTACCTTGATAATATAATTGGTCAGGAAGCAGGGAAAACCGTGATTGAAGAGTATTTACGGCGAAGAGGTTATTCAGAGTTCAGTGCCAACTCAGATGTTCCAACTACCAAATTACATGCGTATGTCAAACCGCCTTCTGTGGAGACATCAGCTAGTGGAACTAAGAAATCGTTTAGAGCATCAAAAGCATCAGGCCGCAGCCATCAAGCAGAACCCAACAAGAATGTGATTGGCAGCAATCAGGAAAATCAGACTCCAACAGTTGGAAGTGAATCAAGAACGTCACAGAAGGGAAACCAAGTGAATCCCAAAAAGAAGAAGGCTGGGAAAGTTGTTTCACTTGCTGAGGCTGCCAAAGGGTCAATTGTGTTCCAGCAGGGAAGGCCATGCTCTTGTCAAGCACGACGACACAAGCTGGTCAGCAATTGCTTGTCTTGTGGCAAAATAGTTTGTGAACAAGAAGGAGAAGGGCCTTGTCATTTTTGTGGTGCACTTGTATTGAGAGAGGGAAGCTCGTATGCCGGTCTGGAAGAAAGTTTGCCTCTCTTGTCAGATGCTGATGCTGCTGCTGAAGCTTATGCAAAAAGGCTTGTAGAATATGACCGGAACTCTGCAGCTCGTACAACAGTTATTGATGATCAAAGTGACTACTATGAGATTGATGGGAACAGTTGGTTGTCAAAGGAGGAAAAAGAACTGTTGAAGAAGAAGCAAGAGGAGATGGAAGAAGCTGAGCGAGCCAAACGGAATAGAGTTGTAGTGACTTTTGATCTTGTTGGCCGCAAGGTCCTTGTGAATAAAGACGAAGTTTCAGAATTGCAGTCTGAAAATAGAATATTACGTCCACGGGATGAAAGGGAAGTCAACCGTATCAAACCAAACCCAACTCTTAAGTTTCAACCGGTTTTTGTGGACCTGGGCTTTAGCAGGAAGTCTGCTAAAGATAAGCAATCACATAAAGGTATAAGCAAGGGCTTGTGCTTAGAGATTACTGGAAGAGTACAGCATGATAGTAATGACCAGAAGTATCTTATGATGGAAAACCAATTGGCAACAGCTTCAAATGAAAATGTTTGGCATGTATCTTCGGGAAATGGAGTGCACATGGAAGCTCATGGTGAATGTTTACCCAGCTATGATAAATAA 1293 0.4408 MESAGEWLEKALVELCSKIETGLGLGLDQEIIKGLVSYCDLAQPPDAKEYLDNIIGQEAGKTVIEEYLRRRGYSEFSANSDVPTTKLHAYVKPPSVETSASGTKKSFRASKASGRSHQAEPNKNVIGSNQENQTPTVGSESRTSQKGNQVNPKKKKAGKVVSLAEAAKGSIVFQQGRPCSCQARRHKLVSNCLSCGKIVCEQEGEGPCHFCGALVLREGSSYAGLEESLPLLSDADAAAEAYAKRLVEYDRNSAARTTVIDDQSDYYEIDGNSWLSKEEKELLKKKQEEMEEAERAKRNRVVVTFDLVGRKVLVNKDEVSELQSENRILRPRDEREVNRIKPNPTLKFQPVFVDLGFSRKSAKDKQSHKGISKGLCLEITGRVQHDSNDQKYLMMENQLATASNENVWHVSSGNGVHMEAHGECLPSYDK* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1971 430 Pfam Putative zinc finger motif, C2HC5-type 177 217 IPR009349 GO:0005634|GO:0006355|GO:0008270
Pvu3g1971 430 PANTHER TRANSCRIPTION REGULATOR/ ZINC ION BINDING PROTEIN 3 428 - -
Pvu3g1971 430 MobiDBLite consensus disorder prediction 93 158 - -
Pvu3g1971 430 PANTHER THYROID RECEPTOR INTERACTING PROTEIN RELATED 3 428 IPR039128 -
Pvu3g1971 430 MobiDBLite consensus disorder prediction 96 151 - -
Pvu3g1971 430 Coils Coil 276 300 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1971 K23398 - gmx:100810833 724.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1971 3 40283400 40285767 Pvu3g1971 3 40283400 40285767 ECH