Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1966 ATGTCAGACAACAACCTTGTTCCCCCAAGATTCTTCATGTTTTGTTTCATGATTATTGCTATGTTCCTTTTGGTTCTATATTCCTCTTTCCTCCTCCACTTCAGCAGCCATTCATTCATTCCTAGATCAGTCTTGGACCTTGTTCTTGCCAACAACACATCACTTGATTTCAAACCCAGTTTCAAGAGGGAACACATTACACCTCCCTTACATTCTCAAGTTTCAAAAGTTCAACCACAAAGGTGCCAACTTTTTAATTCAAGCCAGAAATCAACTTCTCCCAAACAGCTGAGGAAGATGGCGTGTGACACAACCCTTGCTCTCTTAAGGGTGTTCATGTATGACTTACCTCCAGAGTTTCACTTTGGGTTATTGGATTGGAAGGGGAGTGCGAACCAAACATGGCCAATTGTGAATAACCCAAAACATGTCCCTCCATATCCAGGTGGGCTTAATTTACAGCACAGTGTGGAGTACTGGCTCACTCTTGATCTTTTGTCGTCAAACATTGCAAATGTTTTTAGGCCTTGTAGCGCTATTAGAGTACAGAATGCAAGTCAAGCAGATGTGGTTTTTGTGCCATTTTTCTCATCTTTGAGTTACAACCAACATTCCAAAATCCATGGAAAGGAAAAAGTTAGTGTTAATAAAATGCTGCAAGGGAGATTGGTACAGTTCCTGATGGAGCGGGAAGAATGGAAACGTTCTGGAGGGACGGATCATGTGATTGTGGCCCACCATCCTAACAGTATGGTTCATGCAAGAAGAAAGTTAGGTTCTTCCATTTTCGTGCTTGCAGATTTTGGTCGATACCATTCTAAAATAGCCAATATTCAGAAGGATATAATAGCTCCATATAGGCATTTAGTAAACACTATACCAAGAGCAGAGTCAGCTTCATATAAGGAGCGTTCTACACTTCTATATTTCCAGGGGGCAATATATAGGAAATCTGGAGGAGCTGTTCGCCGTGAAATATATCACCTCCTCAAAGATGAGAAAGATGTGCATTTTACGTTTGGAAGCATCAGAAGAAATGGAATTAAGCAGGCAAGCCAGGGCATGGCCTTATCCAAATTTTGCCTAAACATTGCTGGAGATACCCCATCCTCTAATCGCCTCTTTGATGCCATTGTGAGCCACTGTGTACCTGTGATCATTAGTGACGAAATTGAGCTACCATTTGAAGATGTTTTGGACTACTCAGAATTTAGCTTATTTGTCCGTGCCTCAGATGCTGTGAGGAAAGGTTACCTGCTGAATCTTCTTCGTTCAATCAAGCCAGAAAAGTGGACCAAGATGTGTGAAAGGTTAAAGGATATCACACAACACTTTGAGTATCAATATCCAAGCCAGCCTAGAGATGCAGTGAATATGATTTGGGAGCAAGTTGCACATAAGATATCTTCCCTACAGTTAAATTTGCACAGGAAAAATAGATACCATACCAGAGATCTTAGCTTCTTATTATGA 1473 0.4107 MSDNNLVPPRFFMFCFMIIAMFLLVLYSSFLLHFSSHSFIPRSVLDLVLANNTSLDFKPSFKREHITPPLHSQVSKVQPQRCQLFNSSQKSTSPKQLRKMACDTTLALLRVFMYDLPPEFHFGLLDWKGSANQTWPIVNNPKHVPPYPGGLNLQHSVEYWLTLDLLSSNIANVFRPCSAIRVQNASQADVVFVPFFSSLSYNQHSKIHGKEKVSVNKMLQGRLVQFLMEREEWKRSGGTDHVIVAHHPNSMVHARRKLGSSIFVLADFGRYHSKIANIQKDIIAPYRHLVNTIPRAESASYKERSTLLYFQGAIYRKSGGAVRREIYHLLKDEKDVHFTFGSIRRNGIKQASQGMALSKFCLNIAGDTPSSNRLFDAIVSHCVPVIISDEIELPFEDVLDYSEFSLFVRASDAVRKGYLLNLLRSIKPEKWTKMCERLKDITQHFEYQYPSQPRDAVNMIWEQVAHKISSLQLNLHRKNRYHTRDLSFLL* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1966 490 Pfam Exostosin family 109 421 IPR040911 -
Pvu3g1966 490 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 9 480 IPR004263 GO:0006486|GO:0016757
Pvu3g1966 490 PANTHER EXOSTOSIN FAMILY-LIKE PROTEIN 9 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1966 Pvu-Chr3 40211781 40213854 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1966 - - gmx:100809635 794.653
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1966 3 40211781 40213854 Pvu3g1966 3 40211781 40213854 ECH