Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1959 ATGAACTTCAATCTTGCATTAGTTACTGTGGTAATCACCATTTTGGGAATTGGTCTTGATGGATGCCATAGCAAGGTTGTTCAGTTCATTTTCGGAGACTCACTCTCTGATGTTGGTAATAACATGCATCTCTCTAGAAGCCTTGCTCAAGCAAGCTTGCCTTGGTATGGCATAGACATGGGAAATGGGTTACCTAATGGAAGGTTCACTAATGGTCGCACAGTAGCTGACATAATAGGTGACCGTACTGGCCTCCCTAGGCCTCCTGCATTCCTGGACCCATCTGTGAATGAAGAAGTTATACTAGAAAATGGTGTGAACTATGCTTCTGGTGGTGGTGGCATCTTGAATGAAACCGGTGCCTATTTTATCCAAAAGTTTTCCCTGGACAAACAAATTGAGCTATTTCAGGGGACACAAGAGTTAATTAGAGGTAAAATTGGAAAAAGGGCTTCTGACAAGTTTTTCAACGAAGGTCGTTATGTTGTTGCTTTAGGGAGCAACGACTTCATCAACAACTACTTGATGCCAGTTTACAGAGATTCATGGACATACAATGATGACACATTCATGGACTACTTAATAGGAACACTGGAAAGACAACTAAAGTTACTTCATAGTTTAGGAGCAAGACAGCTGGTGGTTTTCGGGTTGGGTCCAATGGGCTGCATTCCCCTTCAAAGGGTGCTCAGTACAACTGGGAATTGTCGAGAAAAGGCGAACAAGCTGGCTCTTACCTTCAACAAAGCTGTAAGCGAGTTAGTAGATGACTTTGGGAAGCATTTTCCTGATTCAACCTATAGATTTGGAGATGCATATGATGTTGTCTATGATGTGATAAGCAATCCAAATAAGTATGGATTTCAAAACTCAGACTCACCATGCTGTTCCTTTTGGAATATTCGACCCGCCCTTACATGTGTACCTGCATCAAGTCTGTGCAAAGATAGAAGCAAATATGTCTTTTGGGATGAGTACCACCCCACAGACAATGCTAATGAGCTGATTGCAAATGAACTCATCAAGAAATTTGGACTTCTAAATTCTGATCAAGGGGGTGCACCTGCACCAGCTCCTGCTGTTGCTCCATCTCCAGAAGACCAATGA 1107 0.4255 MNFNLALVTVVITILGIGLDGCHSKVVQFIFGDSLSDVGNNMHLSRSLAQASLPWYGIDMGNGLPNGRFTNGRTVADIIGDRTGLPRPPAFLDPSVNEEVILENGVNYASGGGGILNETGAYFIQKFSLDKQIELFQGTQELIRGKIGKRASDKFFNEGRYVVALGSNDFINNYLMPVYRDSWTYNDDTFMDYLIGTLERQLKLLHSLGARQLVVFGLGPMGCIPLQRVLSTTGNCREKANKLALTFNKAVSELVDDFGKHFPDSTYRFGDAYDVVYDVISNPNKYGFQNSDSPCCSFWNIRPALTCVPASSLCKDRSKYVFWDEYHPTDNANELIANELIKKFGLLNSDQGGAPAPAPAVAPSPEDQ* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1959 368 Pfam GDSL-like Lipase/Acylhydrolase 29 339 IPR001087 GO:0016788
Pvu3g1959 368 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 1 358 - -
Pvu3g1959 368 SUPERFAMILY SGNH hydrolase 160 343 - -
Pvu3g1959 368 Gene3D SGNH hydrolase 27 344 IPR036514 -
Pvu3g1959 368 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 1 358 - -
Pvu3g1959 368 CDD SGNH_plant_lipase_like 29 343 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1959 Pvu-Chr3 40170837 40173147 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1959 29 340 Acyl Lipid Metabolism Gene Families AT4G10950 32.166 1.29e-57 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1959 - - gmx:100815129 686.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1959 3 40170837 40173147 Pvu3g1959 3 40170837 40173147 ECH