Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1955 ATGAGGGGTAGTAATGCTACTGATTCGAGTAGCAGAGAAGAAAGAAGAAGAAGGGCGAGGTCTTCGTCACCATTGAAGGACCGATCCAAACCCTCTTCCTCAAAGTTATCTTCTTCTTCATCCAAACGAACCACATCATCCTCTGCCACTCTCCTCGACGTCGACGACAACGTCACCTCTCTCTCTCACGATTATCCTAACCCTAACCCTCGGAGCTTCCCTCACACCGTTAAGCAAAAATGCTGGGAAAAGGCCGACAAGGTCAAAGGTCGAGATCCCGACCGCTGGCGCAGGGACGTCCTCGGCAATACTATCTTTCGCAAGCTCGTAGGTTGCCCCGGTTGTCTCTGTCATGACTACGACCACATTGTTCCTTACTCTAAGGGAGGAGAAAGCACTCTGGAAAACTGTCAAGTATTACAGGCAACAGTTAATCGTTCAAAGGGTAATCGAGTAGATATCTCCAAAGCTGAACTTATTCAAAAGAGTTCTTATTGCAGGATTTCAGATCGTGATATGGATCTTCTTGAATTGTCTGCCTATGGCAATGTCCGGCGTGGACCCGATTCTGGGGGATGTAGAATTCAATGA 591 0.4772 MRGSNATDSSSREERRRRARSSSPLKDRSKPSSSKLSSSSSKRTTSSSATLLDVDDNVTSLSHDYPNPNPRSFPHTVKQKCWEKADKVKGRDPDRWRRDVLGNTIFRKLVGCPGCLCHDYDHIVPYSKGGESTLENCQVLQATVNRSKGNRVDISKAELIQKSSYCRISDRDMDLLELSAYGNVRRGPDSGGCRIQ* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1955 196 MobiDBLite consensus disorder prediction 7 25 - -
Pvu3g1955 196 SMART HNH_5 101 146 IPR003615 -
Pvu3g1955 196 MobiDBLite consensus disorder prediction 26 53 - -
Pvu3g1955 196 PANTHER HNH ENDONUCLEASE 12 196 - -
Pvu3g1955 196 MobiDBLite consensus disorder prediction 1 53 - -
Pvu3g1955 196 CDD HNHc 105 149 IPR003615 -
Pvu3g1955 196 Pfam HNH endonuclease 118 151 IPR002711 GO:0003676|GO:0004519
Pvu3g1955 196 PANTHER HNH ENDONUCLEASE 12 196 - -
Pvu3g1955 196 Gene3D - 77 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1955 Pvu-Chr3 40140724 40142605 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1955 - - gmx:100500174 309.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1955 3 40140724 40142605 Pvu3g1955 3 40140724 40142605 ECH