Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1945 ATGGGGCAAGACAATCACCACAAGCGCAGCACCAGCGCCGGTTTACCCACCTCCAACGCCCGAGGCCGGGCCACCGCGCTTCCCCGCGGCCGCCAGATCCAGAAGACCTTCAACAACATCAAGATCACTATCCTCTGCGGCTTCGTCACCATCCTCGTCCTCCGCGGCACCATCGGCGTCAACCTTGGTTCCTCCGATGCCGAAGCCGTCAACCAGAACCTTGTCGAGGAGACCAACCGCATCCTCGCTGAGATCCGATCCGACGCCGACCCCAACGATCCCGACGACCAGCAACCCTTCAACCCCAACGCTACCTTCACCCTTGGCCCCAAAATCGATAATTGGGACCAAGAACGCCAAAATTGGCTCAGTCAAAACCCTGAATACCCTAATTCCATCAGAGGTAAACCTCGCATCTTGCTCCTCACTGGTTCCCCTCCCAAACCCTGTGATAACCCTATTGGAGATCACTACCTCTTGAAGTCCATTAAGAACAAGATTGATTACTGTAGATTACACGGGATTGAAATTGTGTACAATTTGGCTCATTTGGATGTGGAACTTGCTGGCTACTGGGCTAAGTTGCCTATGATTCGGAGGTTGATGTTGTCACATCCCGAGGTTGAGTGGATTTGGTGGATGGATAGTGATGCTTTTTTCACTGATATGGTGTTTGAGCTTCCTATGCCTAAGTACGATGCGTATAATTTGGTTCTTCATGGATACCCTGATTTGTTGTTTGACCAGAAGTCTTGGATTGCGGTGAATACTGGGAGTTTTCTGTTTAGGAACTGTCAGTGGTCTTTGGATTTGCTTGATGATTGGGCTCCCATGGGCCCCAAGGGGCCCGTTCGCGAGGAGGCCGGCAAGATCTTGACGGCCAATCTCAAGGGGAGGCCGGCATTTGAGGCCGACGATCAGTCTGCATTGATATACTTGCTGCTGTCCAAGAAGGAGAAGTGGATGGATAAGGTGTTTCTTGAAAATTCCTTCTATTTGCACGGTTACTGGGCAGGGTTGGTTGATCGGTATGAGGAGATGATTGAGAAGTATCACCCCGGGTTGGGGGATGAGAGATGGCCGTTTGTGACACATTTTGTCGGGTGTAAACCCTGTGGGAGCTATGGAGATTATCCTGTGGAGAGGTGCCTCAGTAGCATGGAGAGGGCTTACAATTTTGCTGATAATCAGGTGCTTAAGCTCTATGGGTTCAGGCATCGTGGTCTGTTGAGCCCCAAGATCAAGAGGATCAGAAATGAGACTGTTACTCCTTTGGAGTTTGTAGACCAATTTGATATTCGGAGGCATTCTACGGAAAGCAAGGGATTGAAGAGCTAG 1338 0.506 MGQDNHHKRSTSAGLPTSNARGRATALPRGRQIQKTFNNIKITILCGFVTILVLRGTIGVNLGSSDAEAVNQNLVEETNRILAEIRSDADPNDPDDQQPFNPNATFTLGPKIDNWDQERQNWLSQNPEYPNSIRGKPRILLLTGSPPKPCDNPIGDHYLLKSIKNKIDYCRLHGIEIVYNLAHLDVELAGYWAKLPMIRRLMLSHPEVEWIWWMDSDAFFTDMVFELPMPKYDAYNLVLHGYPDLLFDQKSWIAVNTGSFLFRNCQWSLDLLDDWAPMGPKGPVREEAGKILTANLKGRPAFEADDQSALIYLLLSKKEKWMDKVFLENSFYLHGYWAGLVDRYEEMIEKYHPGLGDERWPFVTHFVGCKPCGSYGDYPVERCLSSMERAYNFADNQVLKLYGFRHRGLLSPKIKRIRNETVTPLEFVDQFDIRRHSTESKGLKS* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1945 445 MobiDBLite consensus disorder prediction 1 19 - -
Pvu3g1945 445 Pfam galactosyl transferase GMA12/MNN10 family 136 374 IPR008630 GO:0016021|GO:0016757
Pvu3g1945 445 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 135 281 IPR029044 -
Pvu3g1945 445 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 5-RELATED-RELATED 8 439 IPR008630 GO:0016021|GO:0016757
Pvu3g1945 445 MobiDBLite consensus disorder prediction 1 26 - -
Pvu3g1945 445 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 3-RELATED 8 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1945 Pvu-Chr3 40055762 40057593 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1945 10 437 Glycosyltransferase AT5G07720 79.398 0.0 738
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1945 K08238 - gmx:100819400 861.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1945 3 40055762 40057593 Pvu3g1945 3 40055762 40057593 ECH