Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pvu3g1938 | ATGAGTTCTTCTCCGCATCGTTCTCGAGGCGACGGCGAGAAAAGACCGAGGGTTTTCGACTCTAACGCCAAGGCTATCTGTTGGTCCAAGGCTGATACTGTCCTTGGTCGTCACCCTGAGAGGTGGCGCAAAGACGCCGCCGGTAACATTGTCTGCAAACGTTTCTACAACTGCCTCGGCTGCCTCTGCTACGAGTACGATCACATCATTCCCTTTTCTAAAGGTGGCGAGTCCACTGCAGATAATTGTCAAATACTTCAATCAAGAGTTAACAGACTCAAATCGGACAAATATAACATTGATTCAAATCAATTGAAAGACTACTCTTGTGAGGTTGATTTTACTGATAAGGAGCTTGATATAATTGAGATGGCTGTTTATGGAGATGTTATGCGGCCTGGAAATCAGTGCCGTTGCAGAACTATTGCTGAGAAGCTTGGCAAATTCAAAGCAAAAGATGACAAAGATGCTTGTAAGTTGCCACAGGGATGA | 492 | 0.4512 | MSSSPHRSRGDGEKRPRVFDSNAKAICWSKADTVLGRHPERWRKDAAGNIVCKRFYNCLGCLCYEYDHIIPFSKGGESTADNCQILQSRVNRLKSDKYNIDSNQLKDYSCEVDFTDKELDIIEMAVYGDVMRPGNQCRCRTIAEKLGKFKAKDDKDACKLPQG* | 164 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pvu3g1938 | 163 | Pfam | HNH endonuclease | 65 | 96 | IPR002711 | GO:0003676|GO:0004519 | |
| Pvu3g1938 | 163 | PANTHER | HNH ENDONUCLEASE | 12 | 162 | - | - | |
| Pvu3g1938 | 163 | CDD | HNHc | 53 | 95 | IPR003615 | - | |
| Pvu3g1938 | 163 | Gene3D | - | 22 | 116 | - | - | |
| Pvu3g1938 | 163 | PANTHER | F6A14.21 PROTEIN | 12 | 162 | - | - | |
| Pvu3g1938 | 163 | SMART | HNH_5 | 46 | 92 | IPR003615 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pvu3g1938 | Pvu-Chr3 | 39963685 | 39969037 | Dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pvu3g1938 | - | - | gmx:100527904 | 307.375 |
Event-related genes