Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1933 ATGGAGTACTCTAATGGATTTCCTAGAAAAAGAGATGTTTCTCTTGAGGAACTTAGCCAAAGGCTTGCTGAGTTTGCTGAAGTAAGAGGATGGGATCAATATCACAGTCCGAGGAACCTTCTTTTAGCTCTTGTTGGAGAGGTGGGAGAGCTTTCTGAGATATTCCAGTGGAAAGGAGAGGTTGCAAAGGGGCTACCGAATTGGAGTAGTGATGATAAGGAGCACTTAGAGGAAGAGCTTTCAGATGTTTTGCTTTATCTAGTGCGTCTTGCAGATGTTTGTGGGCTAGATCTTGGACAAGCAGCTCTGACTAAAATAGTGAAGAATGCTCAGAAATACCCAGTCACTACTACTGACCATACAACCACTTCCACTCGCAACTAG 384 0.4375 MEYSNGFPRKRDVSLEELSQRLAEFAEVRGWDQYHSPRNLLLALVGEVGELSEIFQWKGEVAKGLPNWSSDDKEHLEEELSDVLLYLVRLADVCGLDLGQAALTKIVKNAQKYPVTTTDHTTTSTRN* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1933 127 PANTHER - 1 121 - -
Pvu3g1933 127 Pfam MazG-like family 47 121 IPR025984 GO:0009143|GO:0047429
Pvu3g1933 127 SUPERFAMILY all-alpha NTP pyrophosphatases 13 117 - -
Pvu3g1933 127 ProSitePatterns Stathmin family signature 1. 8 17 IPR030514 -
Pvu3g1933 127 PANTHER DCTP PYROPHOSPHATASE 1 1 121 - -
Pvu3g1933 127 PIRSF UCP029826_pph 6 127 IPR025984 GO:0009143|GO:0047429
Pvu3g1933 127 CDD NTP-PPase_RS21-C6_like 20 109 IPR025984 GO:0009143|GO:0047429
Pvu3g1933 127 Gene3D - 8 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1933 Pvu-Chr3 39902499 39903440 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1933 K16904 - gmx:100500294 225.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1933 3 39902499 39903440 Pvu3g1933 3 39902499 39903440 ECH